Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2943 |
Symbol | |
ID | 3740837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3333458 |
End bp | 3334192 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637780235 |
Product | recombination protein O, RecO |
Protein accession | YP_385886 |
Protein GI | 78224139 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000000661393 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00131296 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAATCGA CCCGCACCGA AGCCATCGTT CTCGCCGCCA TGGACTACCG GGAGAGCGAC CGCATCGTCA CCCTCTTCAC GCTTCAGTAC GGAAAGGTGC GGGGGGTGGC AAAGGGGGCC AAGCGGAGCG CCCGCCGCTT CGGCCCGGCC CTGGAGCCCT TCGCCCGCAT CGGCGTGGAG CTGGTGGTGC GGGAAGGGCT CTCCTCGCTC CGGGGGGCCG ATATCGTCAC CCTCTATCCC GGCATCCGGC GTGACCTCCG CGCCATCGGC CTCGCCGGCT ACGCCGTGGA GCTCGTGGAC CGCTACCTTC CCGACGGGGC GCCGAGCCCC CGGCTCTTCC GGCTTCTGTC CTCCTATCTG GAGCGGCTCG ACCAGGGGGA ACCGCTGCCG TCGGACCGCC GCTTCTTCGA GGCCAACTTC CTCAATATCC TCGGCTACCG GATATCTCTG GACCATTGCG CCTCCTGCGG CGTGGAGCTT CCGGCAACTG CCGAGCGGCG CACCGGAGCA TCGGGGATGA TCCTCTGTGC CAATTGCGGT CGGTACGGCG CATCGGTCGG GCCGGAAGCC GCGGCGCTCC TGGGCCGATG CATCGCCACG GGGCGGTTCG GGGCTGTGCT CTTCTCCCCT CAGTCCCTGC GGGAGGCCGG TACCCTCCTG GACGGCGCCA TTGCCGCCCA CCTCACCCGT CCCCTCAACT CTCTCGCCTT TCTGAAACAG ATTGAACCCG ATTAA
|
Protein sequence | MESTRTEAIV LAAMDYRESD RIVTLFTLQY GKVRGVAKGA KRSARRFGPA LEPFARIGVE LVVREGLSSL RGADIVTLYP GIRRDLRAIG LAGYAVELVD RYLPDGAPSP RLFRLLSSYL ERLDQGEPLP SDRRFFEANF LNILGYRISL DHCASCGVEL PATAERRTGA SGMILCANCG RYGASVGPEA AALLGRCIAT GRFGAVLFSP QSLREAGTLL DGAIAAHLTR PLNSLAFLKQ IEPD
|
| |