| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2909 |
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| Symbol | |
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| ID | 3740859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3292967 |
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| End bp | 3294460 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637780200 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_385852 |
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| Protein GI | 78224105 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.112824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGCA ACGGCCACAA TCTCCGGCTG GTCGTCAATC GCGACAAGCA GGACTCCCCC
ATCCGGGGGG TGTACCTGGT CACCGACCAC GGCGACCGTC TCGCGGAGCG GGTGGAGGCG
GCAATCGACG GCGGGGTCCG CATCGTCCAA TACCGGAACA AGGGAAAGGA CCGGGCCCAG
CGCTACGCCG TGGGTGAGGA ACTACGGGAC CTCTGCAGCC GGCGGGGGGT GATCTTCATC
GTCAACGACG ACCTGGATCT GGCGCTGCAA CTCAAGGCCG ATGGCATCCA CCTGGGGCAG
GAGGACGGCG ACCCCCGTAT TGCCCGGCGC GAACTGGGAC CGGGTAGAAT CATCGGCGTC
TCCACCCATA CCATGGAAGA AGCCCTGGCG GCCCAGGCGG CGGGGGCCGA CTACATCGGC
TTCGGCGCCA TGTTCCCCAC CAACAGCAAG GAGATCGGGC ACCTGGCCGG GCCCGAGGGG
CTCGCCGCCA TCCGCAGCCG AATCATGATC CCCATTGTTG CCATCGGCGG CATCAGCCGG
GACAACGGCC CACGGGTGGT CGACGCCGGA GCCGACGCCC TGGCGGTCAT CTCGGCGGTT
CTCGCCCATC CGGACCCGTT CCTGGCCGCG ACGGAGCTGG GCCTTCTCTT CAACCGGCGC
GCACCACATC CCCGGGGGGC TGTGCTCACC ATTGCAGGAA GTGACTCGGG GGGCGGAGCC
GGCATCCAGG CCGACCTCAA GACCGCGACA CTGCTGGGGA GCTACGGCTC ATCGGTCATC
ACGGCGCTCA CTGCCCAGAA TACCCGGGGG GTCTCCGGCA TTCACGGCGT CCCCCCCTCC
TTCGTGGCCG AGCAGCTCGA TGCGGTCCTT TCCGACATCC CCGTGGACAC GGTAAAGACC
GGCATGCTCT TCTCTGCCGA AATCATCGCC ACCGTGGCCG ACAAGCTGGC CGAGTACCGG
AAGCGGATCG TGGTGGTGGA CCCGGTCATG GTCGCCAAGG GAGGCGCCCC CCTCATCGAC
CGGGGAGCCG TGAACGTCCT CAAGGACCGC CTCATGCCCC GCACCTACCT CCTCACCCCC
AACATCCCCG AGGCGGAACG GCTCACGGGG CTCACCATCG TCGACGAAGA GGGAATGCAG
GAGGCGGCCC GGCGCCTCTT CCGTCTCGGT GCCCGCAACG TCCTCGTCAA GGGGGGGCAT
CTGGTGGCCG GTGATGCGGT GGACATCCTC TTCGACGGCT CCGCCTTCCA CCGTTTCACC
GCGCCCCGCA TCCTCAGCAA GAACACCCAC GGAACCGGCT GCACCTACGC CGCGGCCATC
GCCACCTACC TGGCCCAGGG AGAGCCGCTC CGGGAGGCCG TTGGCCGCGC CAAGGAGTTC
GTCACCGCCG CAATCCGCCT GGGCCAGCCC CTGGGCCGGG GGCACGGACC GGTGAACCAC
CTCCTCGCCG CGCTTGAAGT CGGGGACCAG GGACCGGGGA CCGGGGACCG GTAA
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| Protein sequence | MGSNGHNLRL VVNRDKQDSP IRGVYLVTDH GDRLAERVEA AIDGGVRIVQ YRNKGKDRAQ
RYAVGEELRD LCSRRGVIFI VNDDLDLALQ LKADGIHLGQ EDGDPRIARR ELGPGRIIGV
STHTMEEALA AQAAGADYIG FGAMFPTNSK EIGHLAGPEG LAAIRSRIMI PIVAIGGISR
DNGPRVVDAG ADALAVISAV LAHPDPFLAA TELGLLFNRR APHPRGAVLT IAGSDSGGGA
GIQADLKTAT LLGSYGSSVI TALTAQNTRG VSGIHGVPPS FVAEQLDAVL SDIPVDTVKT
GMLFSAEIIA TVADKLAEYR KRIVVVDPVM VAKGGAPLID RGAVNVLKDR LMPRTYLLTP
NIPEAERLTG LTIVDEEGMQ EAARRLFRLG ARNVLVKGGH LVAGDAVDIL FDGSAFHRFT
APRILSKNTH GTGCTYAAAI ATYLAQGEPL REAVGRAKEF VTAAIRLGQP LGRGHGPVNH
LLAALEVGDQ GPGTGDR
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