| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2908 |
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| Symbol | |
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| ID | 3740858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3291515 |
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| End bp | 3292654 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637780199 |
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| Product | alanine racemase |
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| Protein accession | YP_385851 |
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| Protein GI | 78224104 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.184968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.271691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAGTC GCCCCACCAT TGCCGAAATC GATCTTGCCG CCCTGCGTCA TAACTTCGAG
CAGGTGCAGC GTGCCGTTCC CGCCGGATGC GGGATTCTTG CCATCGTGAA GGCCGATGCC
TACGGCCACG GCTTCATGGA TATCTCCCGG GAACTGGAGT CCCTGGGGGT GACCGCCTTC
GGCGTGGCGT TTCTGGCCGA GGGAATCCAA CTGCGCAAGA GCGGCATCGA CCGGCCGGTC
CTGATCCTCG GCGGGGTCTA TCCGGGGCAG GAGCGCAAGT GCGTCGGGTT CAACCTCTCC
ACCGCCGTCT TCTCCCTGGA GCAGGCGCGG GTCCTGAACG ACACCGCCGC CCGTCTCTAC
CGCAAGGCGA AGATCCACGT GAAGATCGAT ACCGGCATGG GGCGTCTCGG GGTCGCCGCG
GCCGAGGCCC CGGCCTTTTT CCGGGAACTG CGGGAGATGA AATCCCTGGA ACTGGAGGGG
ATCATCTCTC ACTTCGCCTC CGCCGACGAA CTGGATGATG ATGGCCGCCG CTTCTCGGAC
CGCCAGGCTG CCGTCTTCGC CCAGTCGGTG GCAGAGGCCC GGTCCCTGGG ACTCGACCCC
CGCTACGTCC ACATCGCCAA CAGTGCCGCC GCTTTCGGCA TGGATCTCCC CTTCTGCAAC
CTGGTCCGGC CCGGCATCGT CCTCTACGGG GCGCTTCCGT CGGGTGACTT CGAGGGAAAG
ATGGCGCTCC GGCCCATCAT GCGGCTGCAG AGTACCGTGG CCATGCTCAA GTGGGTGGAG
CCCGGCACCA GTATCAGCTA CGCCCGCCGC TACACGGCCC CGGACCGGCG CCTTATCGCC
AGTGTTCCCG TGGGGTACGC CGACGGCTAC AGCCGGGCCC TGACCAACCG GGGAGAGGTC
CTGATCCGGG GCACGCGGGC ACCGGTGGTT GGGACCGTCT GCATGGACTG GATCATGATC
GATGTGACCT CCGTCCCTGG CGTGGCTGTG GGGGACGAGG TGACGCTCCT TGGCTGCGAC
CGGCAGGGTC ATTGCGTGCG GGCCGAGGAA CTGGCCTCGT GGGCCGGCAC CATCCCCTAC
GAAATTTTCT GCGGCATCAG CAAGCGGGTG CCGCGGGTCT ACCTGAACGC GACCCGGTGA
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| Protein sequence | MDSRPTIAEI DLAALRHNFE QVQRAVPAGC GILAIVKADA YGHGFMDISR ELESLGVTAF
GVAFLAEGIQ LRKSGIDRPV LILGGVYPGQ ERKCVGFNLS TAVFSLEQAR VLNDTAARLY
RKAKIHVKID TGMGRLGVAA AEAPAFFREL REMKSLELEG IISHFASADE LDDDGRRFSD
RQAAVFAQSV AEARSLGLDP RYVHIANSAA AFGMDLPFCN LVRPGIVLYG ALPSGDFEGK
MALRPIMRLQ STVAMLKWVE PGTSISYARR YTAPDRRLIA SVPVGYADGY SRALTNRGEV
LIRGTRAPVV GTVCMDWIMI DVTSVPGVAV GDEVTLLGCD RQGHCVRAEE LASWAGTIPY
EIFCGISKRV PRVYLNATR
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