| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2899 |
|---|
| Symbol | |
|---|
| ID | 3740849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3281739 |
|---|
| End bp | 3282863 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637780190 |
|---|
| Product | cytochrome c family protein |
|---|
| Protein accession | YP_385842 |
|---|
| Protein GI | 78224095 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.167025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 0.604733 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCGCC TCTGGACGGC AGCCATTTTG CATCAAGAGC TACGGCGGGG TGTGGCCCAC
GTAAACTCCA ATGGCACATT CCCTAGATTA CTCCCCGGAG CCGAGCCTGG TCCTATGACA
GCATCCCCTC TCTTCCTTTC CGTTACTGCA GCCGCATTCT GGCTGCTGTT GACGGGCGGC
TTTGCGGCAG CATCTTCCCT GCCTGGCGTG CCCGACGGCT GCAATACCCG CTGCCATAAG
AGCAAGGTGC GGGAGGCTTT TGTGCATGGC CCCGTGGGGT CCGACGACTG TATCTCCTGC
CATAACCCCA CCGGCCTGGA GCATCCGAAA CAGCGCGGAG CGTTCCGACT TGTTGCCGAG
GGGGCGAAGC TGTGCTCCGT CTGCCACGAA GGAAAGGCGG ACAAGAAGGT GGTTCACCCG
CCTGTAGCCA AGGGGGCATG TCTCGATTGC CACGATGTGC ACCAGTCCCC CTACCGGATG
CAGCTCAAGG CGGACGGGGC AGCGCTCTGC TTCGGCTGCC ATGATGAGGA AAAATTCAAG
GCAACGCATC GGCATGCGCC GGTGGCTGAG GGCTCATGCC TCGGGTGCCA CGATCCTCAT
CAGTCCGATA ATCGTGCGCT CCTCAAGGGG AGTGGCGCCG GGCTCTGTTT TATCTGCCAT
GACAAAAAAA TGGCAGAGGG GGTGTCAATT CATGGTCCGG TAGCCGCAGG GGGGTGTACC
GACTGTCACG CCCCTCACGG TTCGCCCTTT TACAAGATTC TGAAAAACGC TTTTCCCGAA
CAGTTCTATC TCCCCTATGC CCAGGAAAAC TTCGCCCTCT GCTTCGACTG TCACACAAAG
GATCTTGCCC AGGACAAGCG TACCGATACC ATCACCGGAT TCCGTAACGG CGACCGTAAC
CTGCACAATC TTCACATCAA CAAGCCCGAC AAGGGACGTT CGTGCAAGAC CTGTCACGAT
CCCCATGCGG CATTGCAGCC GCGGCTCATC AAGGAGAGGA TTCCCGGTTT CGGCACGTGG
GAGATTCCCA TCCGTTATAC GAAAACCGAT ACCGGCGGCA CCTGTGTTGC AGGGTGTCAC
AAGCCCAAGT CATACGACCG TCTTCGGGCA GTGAGAAATC CCTAG
|
|---|
| Protein sequence | MSRLWTAAIL HQELRRGVAH VNSNGTFPRL LPGAEPGPMT ASPLFLSVTA AAFWLLLTGG
FAAASSLPGV PDGCNTRCHK SKVREAFVHG PVGSDDCISC HNPTGLEHPK QRGAFRLVAE
GAKLCSVCHE GKADKKVVHP PVAKGACLDC HDVHQSPYRM QLKADGAALC FGCHDEEKFK
ATHRHAPVAE GSCLGCHDPH QSDNRALLKG SGAGLCFICH DKKMAEGVSI HGPVAAGGCT
DCHAPHGSPF YKILKNAFPE QFYLPYAQEN FALCFDCHTK DLAQDKRTDT ITGFRNGDRN
LHNLHINKPD KGRSCKTCHD PHAALQPRLI KERIPGFGTW EIPIRYTKTD TGGTCVAGCH
KPKSYDRLRA VRNP
|
|---|
| |