| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2881 |
|---|
| Symbol | |
|---|
| ID | 3740792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3262218 |
|---|
| End bp | 3263330 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637780172 |
|---|
| Product | ADP-heptose:LPS heptosyltransferase-like |
|---|
| Protein accession | YP_385824 |
|---|
| Protein GI | 78224077 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 75 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.00275572 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACACTGA GAAACGTCCG CACCGACTGT ATCCATCTCG ATGGCTACAA GCCGTGTCCT
CCCCACAAGA GGAACGGCGT CGTCTGTGGC AACTGTGCCG AGTACCGCCC GGCCCGCTCC
CGGATTCTCA TCTTGAAGGT GGGGGCCGCT GGCGAGGTGA TCCGCAACAC GCCGATCCTC
CACCGGCTCC GCGCTCTCTA CCCCGGCGCC GAGATCACGT GGATGACCGA CTACCCCGAC
TTCATCCCCC GCTCCTTTGT CCAGAGGGTG CTGAAGTTCG ACTGGAAGAA CGCCCTGCTG
GTTCAGGAGC AGGAGTACGA CCTGCTCCTG AGTCTCGACA AGGACACCCA GGTCTGCGCC
GTGGCGAATC GGGTCCGGGC GGCGGTGAAG AAGGGGTTCC TCCTGGGCCC GCAGGGGAAG
ATCGTCCCCG CCGACGACGA TGCCCGCCGC AAGTGGCTGA CCGGGATCTT CGACGACCTG
ATGAAGGAGA ACACCCGGCA CTATGTGGAG GAGACCTTCG AGATCTGCGG TTGGGAGTGG
GCGGGGGAGC GCTACATCCT GGAGAACGTC CCCCGGGTCC CACTTTCGTT CCCCCGGACG
GAGGGGCGGC CGCTGATTGG CCTCAACACT GGCGCCGGCA GCATCTGGCC GACCCGCATC
TGGCCCGAGG ATAGTTGGCG GGATCTGGCA GCGGCGTTGC AGACGCGGGG GTACGACGTC
CTTCTTCTCG GCGGCCCCGA TGAACACGAA AAGAATCTGC GGCTTGCGCG GGAGAGTGGA
GCCCGCTACG AAGGGCTGAA GAACTTCCTG GAGTTCTCGG GGTTGGTCGG CTGCTGTGAC
CTGGTGGTAA CCGCCGTCAC CATGGCGCTC CACATCGCCA TCGCCCTGGA GCGCCGGATC
GTGCTGCTGG ACAACATCTT TAACGCTTCC GAGTTTTATC TCTACGGGCT CGGCTCCATT
GTGCAACCGG AGCTCGACTG TCTCGCCTGC TACAAGCGCG CCTTCGACGG GGGCTGCCCG
GTGGAGGACT GCATGGAGCT GATCAGCGTG GCGGATGTGG CGGCGGCGGT GGAAACGAAC
CTATCCGCAC AGGAGCCGGT TTCAAGCCCA TGA
|
|---|
| Protein sequence | MTLRNVRTDC IHLDGYKPCP PHKRNGVVCG NCAEYRPARS RILILKVGAA GEVIRNTPIL
HRLRALYPGA EITWMTDYPD FIPRSFVQRV LKFDWKNALL VQEQEYDLLL SLDKDTQVCA
VANRVRAAVK KGFLLGPQGK IVPADDDARR KWLTGIFDDL MKENTRHYVE ETFEICGWEW
AGERYILENV PRVPLSFPRT EGRPLIGLNT GAGSIWPTRI WPEDSWRDLA AALQTRGYDV
LLLGGPDEHE KNLRLARESG ARYEGLKNFL EFSGLVGCCD LVVTAVTMAL HIAIALERRI
VLLDNIFNAS EFYLYGLGSI VQPELDCLAC YKRAFDGGCP VEDCMELISV ADVAAAVETN
LSAQEPVSSP
|
|---|
| |