| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2879 |
|---|
| Symbol | |
|---|
| ID | 3740790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3260063 |
|---|
| End bp | 3261049 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637780170 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_385822 |
|---|
| Protein GI | 78224075 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.00677444 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGAC TCAAGCCTCG CGTTTCGGTC ATCGTGCTGA CATGGAACGG GAAGAGGTAT
CTCCCCGGCT GCCTTGGGGC GCTGGCGGTA CAGACTTTTC GGGATTTTGA GGTGATACTG
GTCGATAACG GTTCCGAGGA CGGATCGGGA CAATATGTTC GGGAGGCGTT CCCGTGGGTC
CGACTGGTTG AGCTTCCCGA AAATCTCGGC TTCGCGGAGG GGAATAATCG AGGACTGGCG
ACCGCGCAGG GGAAATTGAT TGTGACGCTC AACAACGATA CGCTGGCGGA GCCGGGTTTC
CTGGCTGAGC TCGTTGGCGC AGCGGAGCGG TATCCTCGCG CCGGAATGAT CGCGGCCCTG
CTGGTGAACT TTTACGATCC CGCTCGAATC GATGCTGCAG GAATCGCCCC GGGGTTCGAT
GGGCTCGGCT ACTGCCTCGG GCACGGCGAA CCGGTGGGCG CTCCGTGGGA TACATCGAGG
GAGGTATTCG GCCCTTCTGC GGGGGCGGCG CTGTATCGAC GGGAAATGAT CGATGAGATT
GGCTTTTTCG ATGCGGCATT CTTTGCCTAC GCGGAGGATT TCGATCTCGC CTGGCGCGGA
CGGCGCGCCG GCTGGCCCTG CATGACGGCC CCGCAAGCCG TTGTTCGCCA TGTCCATTCG
GCCACGAGCG GTACGGAAAG CCCATTCACC ATTTACCATA TTCATCGCAA CAAGTGGTAC
GTGCTCCTGA AGGATTGGCC GACACGCCTT CTGCTGAGGC ACCTCCCACG GATTCTGATG
GCAGATTTGG CCGCATTATC CGTGGCATTG CTGAAAGGGC GGGGCGGTGC TGCCTTGCGA
GCCAGATGGG GAGTGCTTGC TGCGCTCCCA TGGCTTCTGG TTAAACGCCG AGAAGATGAT
GGGAAGCGTG CCCCCCTGCC CGTGGAGCAG TTGTTTGCCC GCGGCCTTTC GCTTGCGGCA
CTGAAGCGGA AGCTGGGGAT GAGCTAG
|
|---|
| Protein sequence | MTGLKPRVSV IVLTWNGKRY LPGCLGALAV QTFRDFEVIL VDNGSEDGSG QYVREAFPWV
RLVELPENLG FAEGNNRGLA TAQGKLIVTL NNDTLAEPGF LAELVGAAER YPRAGMIAAL
LVNFYDPARI DAAGIAPGFD GLGYCLGHGE PVGAPWDTSR EVFGPSAGAA LYRREMIDEI
GFFDAAFFAY AEDFDLAWRG RRAGWPCMTA PQAVVRHVHS ATSGTESPFT IYHIHRNKWY
VLLKDWPTRL LLRHLPRILM ADLAALSVAL LKGRGGAALR ARWGVLAALP WLLVKRREDD
GKRAPLPVEQ LFARGLSLAA LKRKLGMS
|
|---|
| |