| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2871 |
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| Symbol | rpsP |
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| ID | 3738928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3252571 |
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| End bp | 3252837 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637780162 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_385814 |
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| Protein GI | 78224067 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000000000408452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000000516516 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTATCA AGATGCGTTT GGCCCGTGCA GGGGCGAAGA AGAAGCCCTT TTATCAAATT
GTTATTGCTG ACGTGCGCAG CCGCCGTGAT GGGCGGTTTA TCGAGAATGT CGGGACCTAC
GACCCGAACC AGAATCCTGC CGCTGTGAAA TTCGAAGAGG GCAAGGCCCT TGAATGGCTC
GGCAAGGGAG CCCAGCCCAC CGATACCGTC AAGCAGATGC TCAAGACGGC CGGTCTCTGG
GAGAAATTCA CGACCAAGCC TGCATAA
|
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| Protein sequence | MAIKMRLARA GAKKKPFYQI VIADVRSRRD GRFIENVGTY DPNQNPAAVK FEEGKALEWL
GKGAQPTDTV KQMLKTAGLW EKFTTKPA
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