| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2853 |
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| Symbol | |
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| ID | 3741160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3231731 |
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| End bp | 3232804 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637780139 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_385796 |
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| Protein GI | 78224049 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000000542483 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000000111677 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGATCA GAATCGCGCC GCTCCCGGAG GGCCGGAAAA AGCCCAAGTA CACCGACGAA
TCCCAGCTCG GTTTCGGCAA GCTCTTTACC GACCGGATGT TTATGGTCGA GTGGAAAATC
GGCCAGGGGT GGGTCGATGC CCGGATTGAG CCCTATGCCC CCTTCGTCCT CGATCCGGCC
TGCTCTGTTC TTCACTATGC CCAGGAGATC TTCGAGGGGC TCAAGGCCTA CAAGTGGGCC
GACGGCACCA TCACCCTCTT CCGCCCCGAG ATGAACGCTC GACGTTTCAA CCACTCAGCC
GATCGCCTCT GCATGCCAGA GGTGCCGGAG GAGCTTTTCC TTGACGGCAT CGAGAAGCTC
GTGGCGTTGG AGCGCGACTG GATTCCCTCG TCGGAAGGGA CCTCCCTCTA CATCCGTCCC
ACCATGATCG GCGTGGACCC GGTCCTGGGG GTGAAGCCCG CTGATCACTA CTACTTCTAC
GTGATCCTCT CTCCTGTTGG TGCGTATTAC TCCGCGGGGT TCAACCCCAT CAAGATCATG
GTGGAGGACC AGTACGTCCG CTCCGTCCCC GGCGGCACCG GGGAGGCCAA GACCGGCGGC
AATTACGCCT GCTCCCTCAA GGCCGGCCTT GAGGCGAAGA AAAAGGGGTA TGACCAGGTC
CTCTGGCTCG ACGGGGTCCA CCGTCGCTAT ATTGAGGAAG TGGGGGCCAT GAATATGCTC
TTCGCCTATG GGAAGACCAT TGTCACCGCT TCTCTCACCG GCACGATCCT GAACGGCGTC
ACCCGCGACT CCACCCTGAA GCTGGCTGCG AGCCTCGGCT ACACCATCGA GGAGCGCCTC
ATCGACGTGA ATGAGCTCAT GGCGGACATT CGTGCCGGCA AGGTGACCGA GGCTTTCGGC
AGCGGCACTG CTGCAGTCAT CAGCCCGGTC GGCGTTCTTG CGTACAAGGA CGAAGTCTGT
ACGGTCGGCA ATGGCGGCGT GGGGCCGATT ACCCAGCAGC TCTACGATAC TCTGACCGGC
ATTCAGACCG GCAAGGTTCC CGACACCTTC GGCTGGACCC GCAAGATCGC ATGA
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| Protein sequence | MEIRIAPLPE GRKKPKYTDE SQLGFGKLFT DRMFMVEWKI GQGWVDARIE PYAPFVLDPA
CSVLHYAQEI FEGLKAYKWA DGTITLFRPE MNARRFNHSA DRLCMPEVPE ELFLDGIEKL
VALERDWIPS SEGTSLYIRP TMIGVDPVLG VKPADHYYFY VILSPVGAYY SAGFNPIKIM
VEDQYVRSVP GGTGEAKTGG NYACSLKAGL EAKKKGYDQV LWLDGVHRRY IEEVGAMNML
FAYGKTIVTA SLTGTILNGV TRDSTLKLAA SLGYTIEERL IDVNELMADI RAGKVTEAFG
SGTAAVISPV GVLAYKDEVC TVGNGGVGPI TQQLYDTLTG IQTGKVPDTF GWTRKIA
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