| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2843 |
|---|
| Symbol | rpsR |
|---|
| ID | 3741149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3222563 |
|---|
| End bp | 3222883 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637780128 |
|---|
| Product | 30S ribosomal protein S18 |
|---|
| Protein accession | YP_385786 |
|---|
| Protein GI | 78224039 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000000000270954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0000000000000931425 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG AAACTACTGT AAGACCCGAA AGAACTGAAA GATCCGAGCG GCCCGAACGG
CCCCAGTACC GCGGCAACGG CCCGCGCAAG AGAAGACCCT TCCAGCGCCG GAAAGTTTGC
CGCTTCTGCG CGGACAAGGA TCTCGTCATT GACTACAAAG ACCCTCGCGT CCTCCGCTCC
TTCATTACCG AGCGGGGCAA GATCGTCCCT CGCCGGATTT CCGGTAACTG CTCCAAGCAC
CAGCGTGAGA TTACCGAAGC GATCAAGCGG GCGCGCAACA TTGCCCTGAT TCCGATTGCC
TCCACGCACG TTGTCGCGTA A
|
|---|
| Protein sequence | MSEETTVRPE RTERSERPER PQYRGNGPRK RRPFQRRKVC RFCADKDLVI DYKDPRVLRS
FITERGKIVP RRISGNCSKH QREITEAIKR ARNIALIPIA STHVVA
|
|---|
| |