| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2821 |
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| Symbol | |
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| ID | 3741087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3193957 |
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| End bp | 3194943 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637780106 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_385764 |
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| Protein GI | 78224017 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0273473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.296393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTT TCGTTACCGG CGCAACCGGC TTCATAGGCG CTAGCATAGC AAGGGAACTG
CTGAAGGACG GCTGCCATGT CAGGGTTCTG GCCCGGCCCG GCTCCGACAG GCGCAATCTC
GATGGCCTCG ATGTGGAAGT GTGCGAGGGG GACCTCTGTT CCCCGGAATC CCTGGACCGG
GGGGTCAAGG GGTGCGAGGT CCTCTACCAC GCCGCGGCCG ACTACCGCCT CTGGACCCGC
AACCCCGCCG CCATGTACGC CGCCAACGTG GAGGGAACCC GCCACGTCCT GGACGCGGCC
CTGCGGCACG GGGTATCCCG GGTCGTCTAC ACGAGCAGCG TCGGGACCCT GGGAAATCCC
GGCGACGGCA CCCCCGGCAC GGAAGCCACC CCCGTCACCT TCGCCGACAT GGTGGGGGAC
TACAAGAAAA GCAAATTTCT GGCGGAACGG GAGGCTGAGA CGTTCCTGGC CCGGGGACTC
CCCCTGGTCA TCGTGAATCC CTCGACCCCG GTGGGCCCCC ACGACGTGAA ACCGACTCCC
ACCGGAAAGA TCATCGTCGA TTTCCTCAAC CGCGCCATGC CCGCCTACCT GGACACGGGG
CTCAACATCA TCGACGTTGA GGACTGCGCC CAGGGACACA TCCTGGCGGC TCAGCACGGC
AGAATCGGCG AGAAGTACAT CCTCGGCCAC GAGAATCTGA CGTTGCGGCA GATATTCTCT
CTCCTCGAAA CGGTTACGGG ACTCGCAGCG CCGAAGGTGC GCCTCCCCTA CTTACCTATC
CTCGCAGCCG CCTACGCAAA CGAGGCCCTG TCGCGGATCA CCGGCAGGGA GCCCCTCATC
CCGCTGGCAG GGGTGCAGAT GGCCAGAAAA TTCATGTATT TCGATTCGTC CAAGGCGGTG
AAGGAACTGG GGCTTCCCCA GCGCCCGGCC GTCGAAGCCC TGGGGCGTGC GGTGGAATGG
TTCCGCGCCA ACGGATATGT ACGGTAA
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| Protein sequence | MKVFVTGATG FIGASIAREL LKDGCHVRVL ARPGSDRRNL DGLDVEVCEG DLCSPESLDR
GVKGCEVLYH AAADYRLWTR NPAAMYAANV EGTRHVLDAA LRHGVSRVVY TSSVGTLGNP
GDGTPGTEAT PVTFADMVGD YKKSKFLAER EAETFLARGL PLVIVNPSTP VGPHDVKPTP
TGKIIVDFLN RAMPAYLDTG LNIIDVEDCA QGHILAAQHG RIGEKYILGH ENLTLRQIFS
LLETVTGLAA PKVRLPYLPI LAAAYANEAL SRITGREPLI PLAGVQMARK FMYFDSSKAV
KELGLPQRPA VEALGRAVEW FRANGYVR
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