| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2818 |
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| Symbol | |
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| ID | 3741084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3186189 |
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| End bp | 3188138 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637780103 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_385761 |
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| Protein GI | 78224014 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTC CGCTCCGCGT CCTGATCATC GAAGATTCCG AAGACGATGC CCTTCTGATT
CTCCTCGAAC TCAGGAAAGG GGGGTACGAG CCCGAGTACG TGCGGGTCGA GACCCCTGAG
GCCATGATGG AGGCCATTGC CGGCCGGCAG TGGGACATCG CCCTTTCCGA CTACGTGCTC
CCCCGCTTCA GCGGGATTGA TGCCCTCAAT ATCTGGCGCC AGAGCGGTTT TGATGCCCCC
TTCATCATCG TTTCGGGGAA GATCGGCGAA GATACGGCGG TGGGGGCCAT GAGGGCGGGG
GCTAACGACT ATTTCATTAA GGGGAACATT TCGCGGCTCG TCCCCGCCAT CCAGCGGGAG
TTGAAGGAGG CGGAGCTGCG CCGGAAGAAA CGGGAGGCGG AGGAGGCGCT CCTGACCAGC
GAACTCCGCT ATCGCCGGCT CGTGGCGGCT GTTACCGACT ACATCTATAC GGTGGAGGTC
CGTGGGGGGG ACGTTGTGGC AACATACCAC GGTCCCGGCT GCGCGGCGGT CACCGGCTAT
GGCCCCGAAG AGTTCGAGGG GGATCCGTTC CTCTGGTACC GGATGATCCA CGAAGAGGAC
AAGCAGCGGG TGACGGAGCA GACGCAGCAG CTTCTGGAGG GTGAAGACAT CCCCTCCATG
GAACACCGGA TCATCCACAA GGACGGCTCC ATCCGCTGGG TTCGGAACAC CATCGTTCCC
CGCTATGACG AGTTAGGGGG ACTCGCGGCC TACGACGGCC TCATCGCGGA CATCACCGCC
CGCAAGACCG CCGAAATCGA GTTGGGCCTC CGGAGCGCCG CGCTGAATGC CGCGGCGAAC
GCCATTGTCA TCAGCGATCC CGGCGGGCGG GTCATCTGGG TCAATCCCGC CTTCACGAAT
CTTACCGGCT ACACCCTGGA GGAAATCGCC GGCCGCGGTC TCGGCATCCT CAAGTCGGGG
GTCCACGGCG AGGAGTTTTA CCGGGATCTC TGGGAGACGA TCCGGGCCGG AAAGGTCTGG
CGCGGCGAGA TGATCAACCG CCGCAAGGAC GGTTCCCTCT ACCCCGAGGC CCAGACCATT
ACCCCCGTGG TGGATGAGGC GGGAGTGGTT CGCCACTATG TCGCCATCAA GGAGGACGTG
ACCGAGCGCA AGCGTGCCCA GGAGGCACTC CTGGAGAATG CCCGCATGTC CTGCGACATG
GAGCTGGCGC GGCAGATCCA GGGGGCGCTC CTGCCGTCGG CCCCTCCGGT CGTCGCGGGA
GTCCGTTGCG CCGGGCGGTG GGTTCCCGCG GCCCATGTGG GGGGAGACTA CTATGACTTC
TTCCCCCGGG ACGACGGTTC CTTCGACACG GTTATCGCCG ACGTCTCGGG CCATAGTGTC
GGCGCGGCCC TCATCATGAC CGAGGCCCGC AGCGTTATCC GCACCCAGGC CCGCTCCGGC
GGTTCCCCTG CCGCCATCGT CAGATCCCTC AATGAGAACC TCTACGAAGA CCTCACCCGG
GCGGAGCTCT TCACCACCAT GTTCTACGCC TCCTACCGGC CGACATCGGG CATCCTCACC
TACGCCAGCG CGGGGCACAA CCCGCCGCTC CTCTACCGGC GGGCCGAGGG GAGGTGTCTG
GAACTGGACG CGGATGGGCT CATCCTCGGG GTAAAACCCC AGGTGACGTT CGAGGAGCGG
GAGGTGCGGC TGGCGCCGGG AGATATCCTG CTCCTCTACA CCGACGGGAT CACCGAGTCC
GATAACGGCA GCGGAGAGCT TTTCGGGGTC GGCCGCCTCA GTGCCCTCCT GGCGTCGCTC
CACGGCGAGG AGCCCGAGGC GGTCATCGAG GCCGTGCTGT CGGAACTGGC CGCATTCACC
GGCGGCAGGC CCCCTGCGGA CGACATCTGC ACGGTGGCGG TGAAAATCAC GCCATCATCC
GGCTCAGGAT CAGGAGAAAG TTGCGGGTGA
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| Protein sequence | MATPLRVLII EDSEDDALLI LLELRKGGYE PEYVRVETPE AMMEAIAGRQ WDIALSDYVL
PRFSGIDALN IWRQSGFDAP FIIVSGKIGE DTAVGAMRAG ANDYFIKGNI SRLVPAIQRE
LKEAELRRKK REAEEALLTS ELRYRRLVAA VTDYIYTVEV RGGDVVATYH GPGCAAVTGY
GPEEFEGDPF LWYRMIHEED KQRVTEQTQQ LLEGEDIPSM EHRIIHKDGS IRWVRNTIVP
RYDELGGLAA YDGLIADITA RKTAEIELGL RSAALNAAAN AIVISDPGGR VIWVNPAFTN
LTGYTLEEIA GRGLGILKSG VHGEEFYRDL WETIRAGKVW RGEMINRRKD GSLYPEAQTI
TPVVDEAGVV RHYVAIKEDV TERKRAQEAL LENARMSCDM ELARQIQGAL LPSAPPVVAG
VRCAGRWVPA AHVGGDYYDF FPRDDGSFDT VIADVSGHSV GAALIMTEAR SVIRTQARSG
GSPAAIVRSL NENLYEDLTR AELFTTMFYA SYRPTSGILT YASAGHNPPL LYRRAEGRCL
ELDADGLILG VKPQVTFEER EVRLAPGDIL LLYTDGITES DNGSGELFGV GRLSALLASL
HGEEPEAVIE AVLSELAAFT GGRPPADDIC TVAVKITPSS GSGSGESCG
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