Gene Gmet_2818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2818 
Symbol 
ID3741084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3186189 
End bp3188138 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content65% 
IMG OID637780103 
Productputative PAS/PAC sensor protein 
Protein accessionYP_385761 
Protein GI78224014 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTC CGCTCCGCGT CCTGATCATC GAAGATTCCG AAGACGATGC CCTTCTGATT 
CTCCTCGAAC TCAGGAAAGG GGGGTACGAG CCCGAGTACG TGCGGGTCGA GACCCCTGAG
GCCATGATGG AGGCCATTGC CGGCCGGCAG TGGGACATCG CCCTTTCCGA CTACGTGCTC
CCCCGCTTCA GCGGGATTGA TGCCCTCAAT ATCTGGCGCC AGAGCGGTTT TGATGCCCCC
TTCATCATCG TTTCGGGGAA GATCGGCGAA GATACGGCGG TGGGGGCCAT GAGGGCGGGG
GCTAACGACT ATTTCATTAA GGGGAACATT TCGCGGCTCG TCCCCGCCAT CCAGCGGGAG
TTGAAGGAGG CGGAGCTGCG CCGGAAGAAA CGGGAGGCGG AGGAGGCGCT CCTGACCAGC
GAACTCCGCT ATCGCCGGCT CGTGGCGGCT GTTACCGACT ACATCTATAC GGTGGAGGTC
CGTGGGGGGG ACGTTGTGGC AACATACCAC GGTCCCGGCT GCGCGGCGGT CACCGGCTAT
GGCCCCGAAG AGTTCGAGGG GGATCCGTTC CTCTGGTACC GGATGATCCA CGAAGAGGAC
AAGCAGCGGG TGACGGAGCA GACGCAGCAG CTTCTGGAGG GTGAAGACAT CCCCTCCATG
GAACACCGGA TCATCCACAA GGACGGCTCC ATCCGCTGGG TTCGGAACAC CATCGTTCCC
CGCTATGACG AGTTAGGGGG ACTCGCGGCC TACGACGGCC TCATCGCGGA CATCACCGCC
CGCAAGACCG CCGAAATCGA GTTGGGCCTC CGGAGCGCCG CGCTGAATGC CGCGGCGAAC
GCCATTGTCA TCAGCGATCC CGGCGGGCGG GTCATCTGGG TCAATCCCGC CTTCACGAAT
CTTACCGGCT ACACCCTGGA GGAAATCGCC GGCCGCGGTC TCGGCATCCT CAAGTCGGGG
GTCCACGGCG AGGAGTTTTA CCGGGATCTC TGGGAGACGA TCCGGGCCGG AAAGGTCTGG
CGCGGCGAGA TGATCAACCG CCGCAAGGAC GGTTCCCTCT ACCCCGAGGC CCAGACCATT
ACCCCCGTGG TGGATGAGGC GGGAGTGGTT CGCCACTATG TCGCCATCAA GGAGGACGTG
ACCGAGCGCA AGCGTGCCCA GGAGGCACTC CTGGAGAATG CCCGCATGTC CTGCGACATG
GAGCTGGCGC GGCAGATCCA GGGGGCGCTC CTGCCGTCGG CCCCTCCGGT CGTCGCGGGA
GTCCGTTGCG CCGGGCGGTG GGTTCCCGCG GCCCATGTGG GGGGAGACTA CTATGACTTC
TTCCCCCGGG ACGACGGTTC CTTCGACACG GTTATCGCCG ACGTCTCGGG CCATAGTGTC
GGCGCGGCCC TCATCATGAC CGAGGCCCGC AGCGTTATCC GCACCCAGGC CCGCTCCGGC
GGTTCCCCTG CCGCCATCGT CAGATCCCTC AATGAGAACC TCTACGAAGA CCTCACCCGG
GCGGAGCTCT TCACCACCAT GTTCTACGCC TCCTACCGGC CGACATCGGG CATCCTCACC
TACGCCAGCG CGGGGCACAA CCCGCCGCTC CTCTACCGGC GGGCCGAGGG GAGGTGTCTG
GAACTGGACG CGGATGGGCT CATCCTCGGG GTAAAACCCC AGGTGACGTT CGAGGAGCGG
GAGGTGCGGC TGGCGCCGGG AGATATCCTG CTCCTCTACA CCGACGGGAT CACCGAGTCC
GATAACGGCA GCGGAGAGCT TTTCGGGGTC GGCCGCCTCA GTGCCCTCCT GGCGTCGCTC
CACGGCGAGG AGCCCGAGGC GGTCATCGAG GCCGTGCTGT CGGAACTGGC CGCATTCACC
GGCGGCAGGC CCCCTGCGGA CGACATCTGC ACGGTGGCGG TGAAAATCAC GCCATCATCC
GGCTCAGGAT CAGGAGAAAG TTGCGGGTGA
 
Protein sequence
MATPLRVLII EDSEDDALLI LLELRKGGYE PEYVRVETPE AMMEAIAGRQ WDIALSDYVL 
PRFSGIDALN IWRQSGFDAP FIIVSGKIGE DTAVGAMRAG ANDYFIKGNI SRLVPAIQRE
LKEAELRRKK REAEEALLTS ELRYRRLVAA VTDYIYTVEV RGGDVVATYH GPGCAAVTGY
GPEEFEGDPF LWYRMIHEED KQRVTEQTQQ LLEGEDIPSM EHRIIHKDGS IRWVRNTIVP
RYDELGGLAA YDGLIADITA RKTAEIELGL RSAALNAAAN AIVISDPGGR VIWVNPAFTN
LTGYTLEEIA GRGLGILKSG VHGEEFYRDL WETIRAGKVW RGEMINRRKD GSLYPEAQTI
TPVVDEAGVV RHYVAIKEDV TERKRAQEAL LENARMSCDM ELARQIQGAL LPSAPPVVAG
VRCAGRWVPA AHVGGDYYDF FPRDDGSFDT VIADVSGHSV GAALIMTEAR SVIRTQARSG
GSPAAIVRSL NENLYEDLTR AELFTTMFYA SYRPTSGILT YASAGHNPPL LYRRAEGRCL
ELDADGLILG VKPQVTFEER EVRLAPGDIL LLYTDGITES DNGSGELFGV GRLSALLASL
HGEEPEAVIE AVLSELAAFT GGRPPADDIC TVAVKITPSS GSGSGESCG