| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2807 |
|---|
| Symbol | |
|---|
| ID | 3740745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3169234 |
|---|
| End bp | 3169668 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637780092 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_385750 |
|---|
| Protein GI | 78224003 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.295564 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTATC AGACAGGAAC TCCGGGGCGC ATCGTGGTGG CCCGGTTCGA TCACGGCGAG
GACGTTCTGG CCGGGCTTGA GGAAATCGCC CGCCGGGAGG GGCTGCGCGC CGCCGCTTTT
CATATCGTGG GGGCCCTCAA GGGGGGACGC TACGTGGTAG GGCCGGAGGC CGAGGAGCTG
CCGCCGGTGC CGGTCTGGCG CCGGCTTGAG GAAAGCCACG AGGCGGTGGG GTTCGGCACC
ATCTTCTGGG AGGGGGACCG GCCGAAGGTC CACTTCCATG GCGCCTACGG CAAGGGGGAT
GCCGTGCGGG TCGGCTGCCT GCGGGAGGCC TCCGAGGTGT TCCTGGTCCT GGAGGCGATC
ATCACCGAGA TCAGGGGAGT GACCGCCATC CGGGAGCTGG ACCCCGCCTC GGGGATGGTG
CTGCTGAAGG TGTGA
|
|---|
| Protein sequence | MNYQTGTPGR IVVARFDHGE DVLAGLEEIA RREGLRAAAF HIVGALKGGR YVVGPEAEEL
PPVPVWRRLE ESHEAVGFGT IFWEGDRPKV HFHGAYGKGD AVRVGCLREA SEVFLVLEAI
ITEIRGVTAI RELDPASGMV LLKV
|
|---|
| |