| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2792 |
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| Symbol | |
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| ID | 3740730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3156610 |
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| End bp | 3157230 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637780077 |
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| Product | RNA polymerase sigma factor SigZ |
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| Protein accession | YP_385735 |
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| Protein GI | 78223988 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02959] RNA polymerase sigma factor, SigZ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 66 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGACACCG GTCGGGCGGA AAAGCTGCCC GAACGGGTCA ACTGCGTGAC CCGTTATGCC
AGAGAATTTA CAATGAAGAC ATCAGAACAA ATTTGGCAAG AATATCATTT AAGGCTTCGC
GCCTTCATCA AGAGCAGGAT TGCCGATGAC GCAGTTGCAG ATGACACTCT TCAAAACGTA
TTCCTGAAGA TGCATGCCGG ACTGCCGTCC CTGAAGGACG GGACAAAGCT GCAAAGCTGG
CTCTACCAGA TTGCGCGAAA TGCCATCATC GATCTTTATC GCTCGCAAAA GGCCTCGACC
GGTATTCCTG TGTCGTTGGC GCACCCGGAA TCGAATCCGG GCGAAAAGGC CGTTCAAGAG
TTGTCCGACT GTCTTCAGCC CATGATACAA CGGTTGCCGG AGATTTATCG GGAAGCGATC
ATTCTGTCGG AATTGGAAGG CTTGACGCAA AGGGAGGTTG CGGAGGTGCT GGGGACGTCA
CTTTCCGGCG CCAAATCGCG AGTACAGCGC GGACGCGCTC TGCTGAAGGG AATGATAGCT
GATTGCTGCC GGCTTGAGTT AGACCATAAC GGACGGCTCT GCGATTACGA ACGCAAAGGC
AAAGCTTGTG ATGCTTGCTG A
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| Protein sequence | MDTGRAEKLP ERVNCVTRYA REFTMKTSEQ IWQEYHLRLR AFIKSRIADD AVADDTLQNV
FLKMHAGLPS LKDGTKLQSW LYQIARNAII DLYRSQKAST GIPVSLAHPE SNPGEKAVQE
LSDCLQPMIQ RLPEIYREAI ILSELEGLTQ REVAEVLGTS LSGAKSRVQR GRALLKGMIA
DCCRLELDHN GRLCDYERKG KACDAC
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