Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2788 |
Symbol | |
ID | 3739291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3151742 |
End bp | 3153472 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637780073 |
Product | histidine kinase |
Protein accession | YP_385731 |
Protein GI | 78223984 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGA AAAGCGGCAT GGCATGTCGA AGCTGTTTCC TGGTGCTCCT CATCGCGCTG CTCACTTTTT CCAACCTCGC AATCCCCACT GCCGGAGCCG AGGCCCGGGT CGTGACCGTC GGTGTCTATG AAAACTCCCC CAAGATCTTC ACCGACGACT CCGGCAAACC GTCGGGCATC TTCATCGATA TTATCGAGCA CATCGCGAAA ACCGAGGGGT GGAACCTGCA CTATGTGCAC GGCACCTGGG TGGAAGGCCT GGATCGGCTC GCGAAAGGGG AGATCGACCT CATGCCGGAC GTGGCCTATA CGGCCGAGCG GGAAAACCTC TACTCCTTCC ACAGGATTCC GGTTCTCACC GGCTGGTCCC AGGTGTATGC CCGCAAGGGG AGCGGCATCC AATCGATCCT GAACCTGAAC GGAAAACGGG TTGCCGCCCT GGAGCAGACG ATCCAGTTTG AAACCTTCAG GAGGCTCGCC AGCAGCTTCG GGTTGAAGAT CACCCTCATC CCCGTGCCCG ATTACAAGAC CGAGTTCGAC ATGCTTGCCA ATGGCAAGAT TGATGCCGCC GTCACCAACC GTTTCTACGG GTTGAGGCAC GCGAGAGAGT CGGGGCTGGA AGATACGCCG ATCATGTTCG ACCCCGCCCC CTTCTTTTTT GCCGCGCCCC GGGATGCTTC CCGTCACCTG CTGGACGCCA TCGACCGTCA CCTCGCGGAG CTGAAAAAGG ACCCCCGGTC GGCCTATTAT GCATCGCTGA ACCGCTGGAC CTCGGAAGAC GTGCAGTTCA AACTGCCTGT CTGGCTGCAA GTTTCGGGCC TTATCCTGGG GGTGGTTGTC ATAATGACGG TGACCGGGTT CATCCTCTGG AACCGCACGC TCCGGCGGAC CGTCAAGCTC CGCACGGCGC AGCTGGAGCA GGAACTGGCC GAGCGCAAAA TGGCCGAAGA GGAGCTTCGG AAGTACCGGG AAAATCTGGA GGATCTCGTC AGGGAGCGAA CTGCCGAGCT CGCGGTGGCC AAGGAGCGGG CCGAGGCGGC CGACCAGCTG AAATCCGCCT TTCTCGCCAC CATGTCCCAT GAACTGCGGA CCCCCCTCAA CTCCATCATC GGCTTTACCG GCATCCTGCT GCAGGGGCTG GGCGGCCCCA TCAATGACGA ACAGGCCAAG CAGCTGACCA TGGTCAGGCA TAGCGCCAAC CACCTGCTTT CCCTGATCAG CGACGTTCTC GATATCTCCA AGATCGAGGC GGGGCAGTTG AAGATATCTC CTGAGCCGTT CCAACTGCGG GAGTCCGTTC AGAAGGTCAC CCAATCGGTG GCCGGCCTCG TTGACAAAAA AGGTCTGCGC CTCATCCTGG AAATCGCGGA TGATGTGGGA AGCATCGTCA GCGACCAGCG GCGCGTGGAA CAGGTGCTGC TGAATCTACT CAGCAACGCG GTCAAGTTCA CCGAACAGGG GACCATCAGC GTGCGTTGCT CCCGCGAATC GGAGTGGTAC GTCACCAGCG TCGCCGATTC CGGCATCGGC ATCAAGGAAG AGGATCTGGA ACGCCTCTTC AAGCCGTTCC ATCAGGTTGA CACCGGCTTG AGCCGAAAAT ACGAAGGAAC GGGATTGGGG CTCTCCATCT GCAAGCGGCT GGTCGAGTTG ATGGGGGGGA GCATTACGGT GGAAAGCCGC CAGGGAGAAG GGAGCACGTT CTGTTTTCTG CTGCCGGCCA ACGGGGGGTA G
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Protein sequence | MMTKSGMACR SCFLVLLIAL LTFSNLAIPT AGAEARVVTV GVYENSPKIF TDDSGKPSGI FIDIIEHIAK TEGWNLHYVH GTWVEGLDRL AKGEIDLMPD VAYTAERENL YSFHRIPVLT GWSQVYARKG SGIQSILNLN GKRVAALEQT IQFETFRRLA SSFGLKITLI PVPDYKTEFD MLANGKIDAA VTNRFYGLRH ARESGLEDTP IMFDPAPFFF AAPRDASRHL LDAIDRHLAE LKKDPRSAYY ASLNRWTSED VQFKLPVWLQ VSGLILGVVV IMTVTGFILW NRTLRRTVKL RTAQLEQELA ERKMAEEELR KYRENLEDLV RERTAELAVA KERAEAADQL KSAFLATMSH ELRTPLNSII GFTGILLQGL GGPINDEQAK QLTMVRHSAN HLLSLISDVL DISKIEAGQL KISPEPFQLR ESVQKVTQSV AGLVDKKGLR LILEIADDVG SIVSDQRRVE QVLLNLLSNA VKFTEQGTIS VRCSRESEWY VTSVADSGIG IKEEDLERLF KPFHQVDTGL SRKYEGTGLG LSICKRLVEL MGGSITVESR QGEGSTFCFL LPANGG
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