Gene Gmet_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2788 
Symbol 
ID3739291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3151742 
End bp3153472 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content60% 
IMG OID637780073 
Producthistidine kinase 
Protein accessionYP_385731 
Protein GI78223984 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA AAAGCGGCAT GGCATGTCGA AGCTGTTTCC TGGTGCTCCT CATCGCGCTG 
CTCACTTTTT CCAACCTCGC AATCCCCACT GCCGGAGCCG AGGCCCGGGT CGTGACCGTC
GGTGTCTATG AAAACTCCCC CAAGATCTTC ACCGACGACT CCGGCAAACC GTCGGGCATC
TTCATCGATA TTATCGAGCA CATCGCGAAA ACCGAGGGGT GGAACCTGCA CTATGTGCAC
GGCACCTGGG TGGAAGGCCT GGATCGGCTC GCGAAAGGGG AGATCGACCT CATGCCGGAC
GTGGCCTATA CGGCCGAGCG GGAAAACCTC TACTCCTTCC ACAGGATTCC GGTTCTCACC
GGCTGGTCCC AGGTGTATGC CCGCAAGGGG AGCGGCATCC AATCGATCCT GAACCTGAAC
GGAAAACGGG TTGCCGCCCT GGAGCAGACG ATCCAGTTTG AAACCTTCAG GAGGCTCGCC
AGCAGCTTCG GGTTGAAGAT CACCCTCATC CCCGTGCCCG ATTACAAGAC CGAGTTCGAC
ATGCTTGCCA ATGGCAAGAT TGATGCCGCC GTCACCAACC GTTTCTACGG GTTGAGGCAC
GCGAGAGAGT CGGGGCTGGA AGATACGCCG ATCATGTTCG ACCCCGCCCC CTTCTTTTTT
GCCGCGCCCC GGGATGCTTC CCGTCACCTG CTGGACGCCA TCGACCGTCA CCTCGCGGAG
CTGAAAAAGG ACCCCCGGTC GGCCTATTAT GCATCGCTGA ACCGCTGGAC CTCGGAAGAC
GTGCAGTTCA AACTGCCTGT CTGGCTGCAA GTTTCGGGCC TTATCCTGGG GGTGGTTGTC
ATAATGACGG TGACCGGGTT CATCCTCTGG AACCGCACGC TCCGGCGGAC CGTCAAGCTC
CGCACGGCGC AGCTGGAGCA GGAACTGGCC GAGCGCAAAA TGGCCGAAGA GGAGCTTCGG
AAGTACCGGG AAAATCTGGA GGATCTCGTC AGGGAGCGAA CTGCCGAGCT CGCGGTGGCC
AAGGAGCGGG CCGAGGCGGC CGACCAGCTG AAATCCGCCT TTCTCGCCAC CATGTCCCAT
GAACTGCGGA CCCCCCTCAA CTCCATCATC GGCTTTACCG GCATCCTGCT GCAGGGGCTG
GGCGGCCCCA TCAATGACGA ACAGGCCAAG CAGCTGACCA TGGTCAGGCA TAGCGCCAAC
CACCTGCTTT CCCTGATCAG CGACGTTCTC GATATCTCCA AGATCGAGGC GGGGCAGTTG
AAGATATCTC CTGAGCCGTT CCAACTGCGG GAGTCCGTTC AGAAGGTCAC CCAATCGGTG
GCCGGCCTCG TTGACAAAAA AGGTCTGCGC CTCATCCTGG AAATCGCGGA TGATGTGGGA
AGCATCGTCA GCGACCAGCG GCGCGTGGAA CAGGTGCTGC TGAATCTACT CAGCAACGCG
GTCAAGTTCA CCGAACAGGG GACCATCAGC GTGCGTTGCT CCCGCGAATC GGAGTGGTAC
GTCACCAGCG TCGCCGATTC CGGCATCGGC ATCAAGGAAG AGGATCTGGA ACGCCTCTTC
AAGCCGTTCC ATCAGGTTGA CACCGGCTTG AGCCGAAAAT ACGAAGGAAC GGGATTGGGG
CTCTCCATCT GCAAGCGGCT GGTCGAGTTG ATGGGGGGGA GCATTACGGT GGAAAGCCGC
CAGGGAGAAG GGAGCACGTT CTGTTTTCTG CTGCCGGCCA ACGGGGGGTA G
 
Protein sequence
MMTKSGMACR SCFLVLLIAL LTFSNLAIPT AGAEARVVTV GVYENSPKIF TDDSGKPSGI 
FIDIIEHIAK TEGWNLHYVH GTWVEGLDRL AKGEIDLMPD VAYTAERENL YSFHRIPVLT
GWSQVYARKG SGIQSILNLN GKRVAALEQT IQFETFRRLA SSFGLKITLI PVPDYKTEFD
MLANGKIDAA VTNRFYGLRH ARESGLEDTP IMFDPAPFFF AAPRDASRHL LDAIDRHLAE
LKKDPRSAYY ASLNRWTSED VQFKLPVWLQ VSGLILGVVV IMTVTGFILW NRTLRRTVKL
RTAQLEQELA ERKMAEEELR KYRENLEDLV RERTAELAVA KERAEAADQL KSAFLATMSH
ELRTPLNSII GFTGILLQGL GGPINDEQAK QLTMVRHSAN HLLSLISDVL DISKIEAGQL
KISPEPFQLR ESVQKVTQSV AGLVDKKGLR LILEIADDVG SIVSDQRRVE QVLLNLLSNA
VKFTEQGTIS VRCSRESEWY VTSVADSGIG IKEEDLERLF KPFHQVDTGL SRKYEGTGLG
LSICKRLVEL MGGSITVESR QGEGSTFCFL LPANGG