| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2753 |
|---|
| Symbol | |
|---|
| ID | 3740233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3112755 |
|---|
| End bp | 3113741 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637780038 |
|---|
| Product | transketolase, central region |
|---|
| Protein accession | YP_385696 |
|---|
| Protein GI | 78223949 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAAA TGACCTACCG CGATGCCCTG AACAAGGCCC TGAAAGAAGA GATGCGGCGC
GACCCGTCCG TGGTTGCCTG GGGGGAGGAC GTGGCCCTGT ACGAGGGCTC CTTCAAGGTG
ACCCGGGGGC TTCTGGCCGA GTTCGGCGAG GAGCGGGTGA AGGATACCCC CATCTCCGAG
AACACCATCA TCGGCGTCTC CATCGGGGCG GCCATGGGTG GCTTGAGGCC CGTGGCGGAA
CTGATGACGG TGAACTTCGC CCTCCTGGCC ATGGACCAGA TCGTGAACCA CATGGCCAAG
ATCAGCTCCA TGTTCGGGGG GCAGACCCAT CTCCCCATGG TGGTCCGCGC CCCGGGGGGC
GGTGGGAGCC AGCTGGGGGC CCAGCACTCC CAGAGCCTGG AAACCTACTT CATGCACTGC
CCCGGCATCC ATGTGGCGGT GCCGGCGACG CCTGCCGACG CCCGGGGGCT CCTGAAGGCC
TCCATCCGCG ACAACAACCC GGTGATGTTC CTGGAGCACG AGCTCCTCTA CAACAGCAAG
GGGGAGGTGC CCGACGACCC GGAGTTCCTG GTCCCCCTGG GGAAGGCCGA GGTGAAGCGG
GAGGGGAAGG ATGTGACCAT CGTCGCCTAT TCGCGCATGA CCATCCTGGC GCTGCAGGCG
GCGGCGGAAC TGGAGAAGGA GGGGAGCTCC TGCGAGGTGG TGGACCTGCG GACCCTGGCG
CCCCTGGACA CGGAGACCTT TGTTGCCTCG GTGCAGAAGA CCGGCCGGGC CGTGGTGGTG
GAGGAGTGCT GGCGCGCCGC CGGCCTCGGG GGGCACCTGG CCTCCATCAT CGCCGAGGAG
TGCTTCGACC GGCTCCTGGC GCCGGTGCGG CGGGTGTCGG GGCTCGACGT CCCCATGCCT
TACTCGCGCA AGATCGAGAA GCTCTGCATC CCGCAGGTGG AGACCATCGC CGCAGCGGTT
CGGGACGTAA TGAGTCAGAA ATACTGA
|
|---|
| Protein sequence | MHEMTYRDAL NKALKEEMRR DPSVVAWGED VALYEGSFKV TRGLLAEFGE ERVKDTPISE
NTIIGVSIGA AMGGLRPVAE LMTVNFALLA MDQIVNHMAK ISSMFGGQTH LPMVVRAPGG
GGSQLGAQHS QSLETYFMHC PGIHVAVPAT PADARGLLKA SIRDNNPVMF LEHELLYNSK
GEVPDDPEFL VPLGKAEVKR EGKDVTIVAY SRMTILALQA AAELEKEGSS CEVVDLRTLA
PLDTETFVAS VQKTGRAVVV EECWRAAGLG GHLASIIAEE CFDRLLAPVR RVSGLDVPMP
YSRKIEKLCI PQVETIAAAV RDVMSQKY
|
|---|
| |