Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2748 |
Symbol | |
ID | 3740016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3107219 |
End bp | 3109069 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637780033 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_385691 |
Protein GI | 78223944 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.459436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACG ACTCCTATCG CAAGTCGTTG AATTTCCTCT TTGTGGAGTT GCTGGAGAAT GTCCTGCGGC TGGCGGAGAA CCCGGGGGAG TGCGGCAGCT ACATCACGGC GCAGATCCGC GAGCTGATCG GGGTGCGGAT TGTGGCGCTG ATGCAGTGCG TCCCGTCTTC CGAGCGGCCG GCGTATGAAC TGGTGAGTGT CTGCCCCGGC CGGGCGCAAG GGGGGGAGCG CCCGGAATCC TTGCGGCGTC TTGCCGCACG AAGCCATGCC GTTCATGGGC CCGTTGTCTG GTCGTCCGGG GAGAGCCCGC CGGAGGCGAA GGAGCTTCTC GCCCCGGCGG AAGAATCCGA CAGCCTGGTC TTCCCCCTCG ATGCCGGCGG TGAAAGGGTC GGCGTCCTCA TGCTGCTGGG GGTCATGGAG AGCACCGGCC TCGACACCAT CTACGCCTCC CTGGCACGGC TTTCGGGCGT TCTGTCCCTC GTGCTCCGCA ACAGTCTCCT CTACAAGGAC CTGGAGCGGA AAGTGGCGGA GCGGACCGAG AAGCTGCTGT GGCAGGCGCG GGTGGATGCC GCCCTGGCCG AACTCTATCC CCCCCTCATC TCCACCTACG CCACGTTCAG GGACATAGCG CTCATCGTCC TGGAAAAGGC CAAGGAGTTG ACCGGGAGCG ACCACGGTTA CGTGGGAATC GTCGAGTCGG AAACCGGCGT CATGCAGTTG AACCTCACCA CCGACATGAT GGAGGGAATC GACTGTTTTG CCTCCCCGGG GAGGAACCTG GCATTTGTAC CCGATGCCGC CGGGCACTAT GGGGGACTGT GGGGGCACTC CCTCAACACG CGTAAGCCGT TCTACACCAA CAACCCCTCC CGCCATGGGG CCGCCAAGGG GGTGCCGCAG GGGCATATTG CCGTTCTCCG GTTCCTGTCG GTGCCGGTGG TTTTCGGCCA CGCCCTCGTC GCCCAGATTT CCCTCGCCAA TCCTCCGCGC GATTACACGG ACCCGGACCT CGACGCCATC TGCCGGATGT CGGAGTTTTT GGCCCTTGCC ATCCAGCGGT TGCGGAGCGA GGAGGAGATC CGCCGGCTCA ACACCGAACT GGAGCGGCGG GTCCATGAGC GGACGGCCCA ACTGGAGGCC AGCAACCGGG AGCTGGAGAG CTTCTGCTAT TCGGTGTCCC ATGACCTGCG GGCTCCGTTG CGTCATATCG AGGGATACAG CGCCCTGCTC GTGGAAGATT ACTGCCGGGA GATCAACGAC GAGGCCCACG GTTACCTGGA GCGGATCAGA GCGGCCACCG CCAAGATGGA GCAGCTGATA GACGCGCTGC TGAACCTGTC GCGGCTGTCA CGGGAGCCCC TGAGGCGCGT TTCCCTCGAC CTGTCGCGGA TGGTACGCAA GGTGGCCGAG GATCTCGCTC TGTCCGAACC TGCCCGCAGC GTGGCCTTCA GGATCACCGA AGGGGTCCGG GTGCATGCCG ATCCCGTGCT GATGGGGGTG GTCATGACCA ACCTCCTCCA CAATTCCTGG AAGTACACCG CCAACAAGGA GGATGCGCGG ATCGAGTTCG GCACCGCCGA GGCAAACGGC GAGACGGTGT ATTTCATCCG CGATAACGGC GCCGGGTTCG ACATGCGGTA CGTGGGGAAG CTCTTCGGCG CCTTCCAGCG GCTCCACTCC GCCGAAGAGT TCGAGGGGAT CGGCATCGGG CTGACAACGG TGCAACGGGT CATCCATCGC CACGGCGGTA CCATCCGGGC CGAGGGAAGG CCCGGGGAAG GCGCCTGCTT CTCATTCACC CTTGGCAGCG AAACACCCCC TGTCCCGCCG AACGTCGCCG ACCCGGCATG A
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Protein sequence | MSDDSYRKSL NFLFVELLEN VLRLAENPGE CGSYITAQIR ELIGVRIVAL MQCVPSSERP AYELVSVCPG RAQGGERPES LRRLAARSHA VHGPVVWSSG ESPPEAKELL APAEESDSLV FPLDAGGERV GVLMLLGVME STGLDTIYAS LARLSGVLSL VLRNSLLYKD LERKVAERTE KLLWQARVDA ALAELYPPLI STYATFRDIA LIVLEKAKEL TGSDHGYVGI VESETGVMQL NLTTDMMEGI DCFASPGRNL AFVPDAAGHY GGLWGHSLNT RKPFYTNNPS RHGAAKGVPQ GHIAVLRFLS VPVVFGHALV AQISLANPPR DYTDPDLDAI CRMSEFLALA IQRLRSEEEI RRLNTELERR VHERTAQLEA SNRELESFCY SVSHDLRAPL RHIEGYSALL VEDYCREIND EAHGYLERIR AATAKMEQLI DALLNLSRLS REPLRRVSLD LSRMVRKVAE DLALSEPARS VAFRITEGVR VHADPVLMGV VMTNLLHNSW KYTANKEDAR IEFGTAEANG ETVYFIRDNG AGFDMRYVGK LFGAFQRLHS AEEFEGIGIG LTTVQRVIHR HGGTIRAEGR PGEGACFSFT LGSETPPVPP NVADPA
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