Gene Gmet_2748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2748 
Symbol 
ID3740016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3107219 
End bp3109069 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content65% 
IMG OID637780033 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_385691 
Protein GI78223944 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.459436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG ACTCCTATCG CAAGTCGTTG AATTTCCTCT TTGTGGAGTT GCTGGAGAAT 
GTCCTGCGGC TGGCGGAGAA CCCGGGGGAG TGCGGCAGCT ACATCACGGC GCAGATCCGC
GAGCTGATCG GGGTGCGGAT TGTGGCGCTG ATGCAGTGCG TCCCGTCTTC CGAGCGGCCG
GCGTATGAAC TGGTGAGTGT CTGCCCCGGC CGGGCGCAAG GGGGGGAGCG CCCGGAATCC
TTGCGGCGTC TTGCCGCACG AAGCCATGCC GTTCATGGGC CCGTTGTCTG GTCGTCCGGG
GAGAGCCCGC CGGAGGCGAA GGAGCTTCTC GCCCCGGCGG AAGAATCCGA CAGCCTGGTC
TTCCCCCTCG ATGCCGGCGG TGAAAGGGTC GGCGTCCTCA TGCTGCTGGG GGTCATGGAG
AGCACCGGCC TCGACACCAT CTACGCCTCC CTGGCACGGC TTTCGGGCGT TCTGTCCCTC
GTGCTCCGCA ACAGTCTCCT CTACAAGGAC CTGGAGCGGA AAGTGGCGGA GCGGACCGAG
AAGCTGCTGT GGCAGGCGCG GGTGGATGCC GCCCTGGCCG AACTCTATCC CCCCCTCATC
TCCACCTACG CCACGTTCAG GGACATAGCG CTCATCGTCC TGGAAAAGGC CAAGGAGTTG
ACCGGGAGCG ACCACGGTTA CGTGGGAATC GTCGAGTCGG AAACCGGCGT CATGCAGTTG
AACCTCACCA CCGACATGAT GGAGGGAATC GACTGTTTTG CCTCCCCGGG GAGGAACCTG
GCATTTGTAC CCGATGCCGC CGGGCACTAT GGGGGACTGT GGGGGCACTC CCTCAACACG
CGTAAGCCGT TCTACACCAA CAACCCCTCC CGCCATGGGG CCGCCAAGGG GGTGCCGCAG
GGGCATATTG CCGTTCTCCG GTTCCTGTCG GTGCCGGTGG TTTTCGGCCA CGCCCTCGTC
GCCCAGATTT CCCTCGCCAA TCCTCCGCGC GATTACACGG ACCCGGACCT CGACGCCATC
TGCCGGATGT CGGAGTTTTT GGCCCTTGCC ATCCAGCGGT TGCGGAGCGA GGAGGAGATC
CGCCGGCTCA ACACCGAACT GGAGCGGCGG GTCCATGAGC GGACGGCCCA ACTGGAGGCC
AGCAACCGGG AGCTGGAGAG CTTCTGCTAT TCGGTGTCCC ATGACCTGCG GGCTCCGTTG
CGTCATATCG AGGGATACAG CGCCCTGCTC GTGGAAGATT ACTGCCGGGA GATCAACGAC
GAGGCCCACG GTTACCTGGA GCGGATCAGA GCGGCCACCG CCAAGATGGA GCAGCTGATA
GACGCGCTGC TGAACCTGTC GCGGCTGTCA CGGGAGCCCC TGAGGCGCGT TTCCCTCGAC
CTGTCGCGGA TGGTACGCAA GGTGGCCGAG GATCTCGCTC TGTCCGAACC TGCCCGCAGC
GTGGCCTTCA GGATCACCGA AGGGGTCCGG GTGCATGCCG ATCCCGTGCT GATGGGGGTG
GTCATGACCA ACCTCCTCCA CAATTCCTGG AAGTACACCG CCAACAAGGA GGATGCGCGG
ATCGAGTTCG GCACCGCCGA GGCAAACGGC GAGACGGTGT ATTTCATCCG CGATAACGGC
GCCGGGTTCG ACATGCGGTA CGTGGGGAAG CTCTTCGGCG CCTTCCAGCG GCTCCACTCC
GCCGAAGAGT TCGAGGGGAT CGGCATCGGG CTGACAACGG TGCAACGGGT CATCCATCGC
CACGGCGGTA CCATCCGGGC CGAGGGAAGG CCCGGGGAAG GCGCCTGCTT CTCATTCACC
CTTGGCAGCG AAACACCCCC TGTCCCGCCG AACGTCGCCG ACCCGGCATG A
 
Protein sequence
MSDDSYRKSL NFLFVELLEN VLRLAENPGE CGSYITAQIR ELIGVRIVAL MQCVPSSERP 
AYELVSVCPG RAQGGERPES LRRLAARSHA VHGPVVWSSG ESPPEAKELL APAEESDSLV
FPLDAGGERV GVLMLLGVME STGLDTIYAS LARLSGVLSL VLRNSLLYKD LERKVAERTE
KLLWQARVDA ALAELYPPLI STYATFRDIA LIVLEKAKEL TGSDHGYVGI VESETGVMQL
NLTTDMMEGI DCFASPGRNL AFVPDAAGHY GGLWGHSLNT RKPFYTNNPS RHGAAKGVPQ
GHIAVLRFLS VPVVFGHALV AQISLANPPR DYTDPDLDAI CRMSEFLALA IQRLRSEEEI
RRLNTELERR VHERTAQLEA SNRELESFCY SVSHDLRAPL RHIEGYSALL VEDYCREIND
EAHGYLERIR AATAKMEQLI DALLNLSRLS REPLRRVSLD LSRMVRKVAE DLALSEPARS
VAFRITEGVR VHADPVLMGV VMTNLLHNSW KYTANKEDAR IEFGTAEANG ETVYFIRDNG
AGFDMRYVGK LFGAFQRLHS AEEFEGIGIG LTTVQRVIHR HGGTIRAEGR PGEGACFSFT
LGSETPPVPP NVADPA