Gene Gmet_2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2721 
Symbol 
ID3740028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3073565 
End bp3075625 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content62% 
IMG OID637780006 
Productdiguanylate cyclase with GAF sensor 
Protein accessionYP_385664 
Protein GI78223917 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.53529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCATG CTGAACTGAC TACAATCCAG CCGGTGGAGC TGCTTGAGGT ACTCAAATCG 
TACCCCTTCC TCGCGCCCTA CCAGCTGACC TTCTGCGCCG AGACAGAAGG GGGAATGCCG
CTCTACCGGT CCCTCTTCCC CGTCTGCGAG GCCATCGCCC AGAGCCTGCT CTGCGGCAAG
GCCTGCCAGA CGGCCGTGGA AGAGGCAGTC CAGAGGGCCA TGGGCGAAAA CAGGGCGGTG
GTCTTCCGGT GTCAGACAGG ACTCCTCAAT TTTGCCGTGC CGCTCCGGGG GAGGGATATC
CCCTTCACCT GCCTCATCGG CGGCGGAGTC AGGGAGAAAG ATGTCGACCT GGCCCCCATG
GAATCCCTCG CCCAGACAGA CAGCGTGGAC GCTGTTGCCC TTCTGGAAGA GTTGGAAAAC
CTCCCCGCCG TCACCGAGGA GGAGGTGGCC GAAACTGCCC GCAAGATTCA CGAACTGCTT
CCGACACTGC TCGGCCGGAA CATCCACACC CTCATCTTCG AAAACACCAT GCGGCGGCTC
GCCTCCATCT CCGGGGTTGC CGGCGGCATC GACGCGGCAA AGACCGCCGA CGAAGTCCTG
GGGCTGTTGA GCGAGACCCT CGGCATCCTC TTCGATATCG GCCGGATCGC CATGCTCTCC
CCCGAAGGAA GCAGCACATT CTCCATGAAG GGGCTCTGGG GGATGGAGCC CGACCTGGGA
ACCATGCCGG CGGCACGGGC GTTGTCGATC TTTCCCCGCA ACCGGAAAGA GAACGTCGTC
ACCCTCGACG ATGAGTGCCG GACCCTCTTC CCTGAAATCG CCGCCAATCA GGGGTTGTGC
ATCCGCTTCG CCTCCAACGG TGATTTTCTC GGCATCATGG TTCTCTTCGA TGCGGCCATC
ACCCGCCGGG ACAAGCTCCT CGTGCAACTG GTCGCCGACC GGGCCTCGGC GAAACTCCTG
CGCCTGCGGG AGGAGGAAAA GCACTCCGCC GACAATGCCC AGGCAACCAA GCTCATGACC
ATGTTCACCG CCCTCTCCCG GGCCACCTCC AAGGAAGAGC TCAACGAGCA AATCCTCGCC
ATGGCGGCCG ACCTGGCGGA TGCCTCCAGC GGCTCCCTCA TGTTCATCGA CGAAAACGGC
GAAAACCTCA AAATCGAGGC GGCCCTCGGC ATGAACATGC AGCTGGCCCA GAGCATGGTG
GTCCAGGTGG GGAGCGGCAT TGCCGGCAAG GTGGCGGCCA GCGGCAACCC CCTCCTTGTG
AACGACATCG AGAAGGACAA GCGGATCGGC ATCCCCAACC GTCCCCGTTT CAAGACAAAG
TCATTCGTCA GCATCCCCAT CAAGCTCAGG GAGAGCGTCG CCGGCGTTCT GAACCTGTCG
GACAAGAAGA ATCAGGGGAT TTTCACCGAG AATGACCTGA ATCTGCTCAT CACCTTCGCC
GACCATGCCT CCATCATGAT CGAGCGGGCC CTGTCCATCG AGCGGGCAGA CTTCCTGGAA
CAGCTGTCAA TCACTGACCC GCTGACTGGC CTCTACAACC GCCGCTTTCT CAAGCGTCGC
ATGGAAGAGG AACTGGCCCG GAGCATCCGG CAGAACCTCT CCCTCACCGT GATGCTCATC
GACCTGGACA ACTTCAAGAT CTACAACGAC CTCTGCGGCC ACCTGGCCGG CGACCGGGCA
CTGAAGAAAA TGGCACGGAT CCTCTCCGAC ACCGCCCGGC AGATGGACGT GGTAACCCGC
TACGGCGGGG AGGAGTTCTG CATCATCCTT CCCGGCACCT CCAAGAAGGA ATCGCTCTTT
GTGGCCGAGC GGATTCGGCG CGAGATCGAA GGGGAGGAGT TTTCACACGA GGAGAACCTC
CCCCAGGGGC GCCTCACTGC CAGCATCGGC GTCTCCTCCT TCCCGGAGGA CGGCAACGTC
GAGGCAGTAC TCGTCAAGGC CGCCGACGTG GCCCTCTACC GCGCCAAATC GGAGGGACGC
AACCGGGTGG TTATCTCCGG CCCACCGCCG GCCGAGGAGG AACACGGCAC CCGCCTCAAG
ACCGTCACTA ATCTGCCATG A
 
Protein sequence
MHHAELTTIQ PVELLEVLKS YPFLAPYQLT FCAETEGGMP LYRSLFPVCE AIAQSLLCGK 
ACQTAVEEAV QRAMGENRAV VFRCQTGLLN FAVPLRGRDI PFTCLIGGGV REKDVDLAPM
ESLAQTDSVD AVALLEELEN LPAVTEEEVA ETARKIHELL PTLLGRNIHT LIFENTMRRL
ASISGVAGGI DAAKTADEVL GLLSETLGIL FDIGRIAMLS PEGSSTFSMK GLWGMEPDLG
TMPAARALSI FPRNRKENVV TLDDECRTLF PEIAANQGLC IRFASNGDFL GIMVLFDAAI
TRRDKLLVQL VADRASAKLL RLREEEKHSA DNAQATKLMT MFTALSRATS KEELNEQILA
MAADLADASS GSLMFIDENG ENLKIEAALG MNMQLAQSMV VQVGSGIAGK VAASGNPLLV
NDIEKDKRIG IPNRPRFKTK SFVSIPIKLR ESVAGVLNLS DKKNQGIFTE NDLNLLITFA
DHASIMIERA LSIERADFLE QLSITDPLTG LYNRRFLKRR MEEELARSIR QNLSLTVMLI
DLDNFKIYND LCGHLAGDRA LKKMARILSD TARQMDVVTR YGGEEFCIIL PGTSKKESLF
VAERIRREIE GEEFSHEENL PQGRLTASIG VSSFPEDGNV EAVLVKAADV ALYRAKSEGR
NRVVISGPPP AEEEHGTRLK TVTNLP