| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2682 |
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| Symbol | |
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| ID | 3740105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3029684 |
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| End bp | 3030427 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637779967 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_385625 |
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| Protein GI | 78223878 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00119913 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.584749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGTC TACTTGTGCT GATCGTCATG GCGCTCTTTT CCCTCACAGC CTGTGCCGTA
ACCGACGCCT CCCGGAAGCA AGCATCCTAT CACTTTCAAA TGGGTCTTTC CTATCTAGGG
GAAAACGATG CGACCCGTGC CCTTATCGAA CTCGCTGAAG CGGAGAAGCT AACCCCCGAT
GATCCCGCCC TCCTGAACAG CCTCGGCCTC GCCTATTTCT ACAAAAAACG GTACGATCTC
GCCGAACTCA AGTATCGTAG GGCTATCGAG CTGAAGCCCG ATTATTCCGA GGCCAGGAAC
AACCTGGGGG TGAACTACCT GGAGATGCAG CGGTGGGATG ATGCCGTGGC CCAGTTCACG
TTGGTTCTGG CCGATCTGTT CTTCATCAAC CATGAGGACG CCCGGATTAA CCTCGGTCTC
GCCTATCTGG GCAAGGGCGA TTATCCGAAG TCACTCGACA TTCTGCGTCA GGCGGTTGCA
ACCTCTCCCC AGAACATTGT CGCCCGGGTT GGCCTCGGCC GGGTATACTT TGCCATGGAC
CGCAACGATC TGGCGATTCA GGAATTCACC AAGGCCGTTG AGCTTAACAA GAATTATCAG
AACGGATACT ACTATCTTGC CCTTGCCCAT CTGAAGGGTA AAGACTATGT GTCTGCAGCC
GATGCGTTCC GCGAGGCGAT CCGGATAGCA CCCGATTCGG AGAAGGGGCG TCTTTCCCGG
GAATATCTGG AATCAATGCG CTGA
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| Protein sequence | MKRLLVLIVM ALFSLTACAV TDASRKQASY HFQMGLSYLG ENDATRALIE LAEAEKLTPD
DPALLNSLGL AYFYKKRYDL AELKYRRAIE LKPDYSEARN NLGVNYLEMQ RWDDAVAQFT
LVLADLFFIN HEDARINLGL AYLGKGDYPK SLDILRQAVA TSPQNIVARV GLGRVYFAMD
RNDLAIQEFT KAVELNKNYQ NGYYYLALAH LKGKDYVSAA DAFREAIRIA PDSEKGRLSR
EYLESMR
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