| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2642 |
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| Symbol | |
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| ID | 3740220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2989635 |
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| End bp | 2993285 |
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| Gene Length | 3651 bp |
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| Protein Length | 1216 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637779928 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_385586 |
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| Protein GI | 78223839 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.974276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTGGT ATGCAGATCT GAAGATCAGG AACAAGCTGC TTCTCGGCTA CGGAACGGTC
ATCGCCTTCA GTTCCCTGAT CGGTTATTTC GGTGTCACCG GTTTGACAGA AATGAAGTCA
CATCTGGATG CCATGCATGA CCACCTGATT CCGGGCATAG AGACGGCGGC AATGATCGAC
CGCCATCACC AGCAGCATCG CCGAACGTTT TTGAACTACC TGGAGGAGAA TCGCCTGCAC
CGCAAAGAGC TGGAGTTGAA ACTCCACCAT GAAGCGATAG ACATACAGGA GTCCTTGAAA
CGTTACGCCA AGCTTTCGAT TTATCCTGCG GAGAGACGAC TTCTGGATGA TGTCATCACT
GCCTCGAAGG AATACATGGA TGAGACGGCA AGACTCAAGT CAGCGGCCGA TTCAGGCGCT
GACTACGAAA CGCTGACTGT CGACAATGCG CACCTGAGGA CTCTTTTCGG CGATGTTGAA
AACCGAGCGA AGCTGCTCAC ACAGTACAGC CTGAAAGAAG GGGACGAGCA TCTCGACCAG
AGCACCGCCG GCTACTTCAA TATCCGCTCG TGGCTGATAT CGCTCCTTCT CGGCGCTATC
GCCATTGCAC TGGCCATGGC GTTCTTCATC ACGCGGAGCG TGGCCGACCC CATCCGAGTG
GTCCTCGATG CCGTGCGCCG GATGGAAGAG TCGGGGACGG AAAAGGCCCG GCTGGCGGAG
GCCATTGCAG CCGGCGACCT GACCCAGGAC GTGGCCGTGT CGGAGCGGCT CCGGATTGAT
CCTGAAACCG TTGCCAGGGA CGAGGGCGGA ATGATGCTCC GGGCGGTGGC CGGCATGAGC
GGCATCCAGG CATCCCTCGA CGCTGCATTT TCACGGATGA CGGACTCGCT GCGCCGGAAC
CGGCAGGAGG AGCAGGCACG GGACTGGCTG AAAAGTGGCG CCAATGAACT CGGCGCCATT
CTTCGGGGGG ACCGGCGGCT GGAGGAAATG GTTGAAAAGA GCCTCTCTTT CCTCTGCGAA
TACCTGGGGG CCGGCGTCGG TGTCCTCTAT CTGTACAACG ACAGGACCCG TGATCTGGAG
ATTGCCGCCA CCTACGCCCT TGCCCGCCGG GAGGATATGA AGAAGCGGTT TGCCCTCGGG
GAGGGCTTGG TGGGGGAGGC GGCCAAGGAG AGGAGGATTA TCCGCCTCGC CGATGTCCCT
CCCGGCTATC TCCCCATAAG TTCGGCCATT GGCGAGGCGA AGCCCCTCAA CATCGCCGCG
GTGCCGCTGC TCCATGACAA TCTTCTCGTG GGGGTTGTGG AAATAGGCTC CTTCAGGGAA
TTCACGGCGC GGGAACTGGA GTTCCTCAGC CGGGCCCAGG AGGGGCTATC CATCGGGATC
AACGTCAACC GTTCGCGGAA GCTCGTGGAC GAGCTGCTTG AACAGACCCA GGCCCAGACC
GAGGAGCTGC GGGTCCAGCA GGAAGAGCTC CAGCAGACCA ACGAGGAGCT TGAGGAGCGG
GCCCAGATGC TGGAGCAGCA GCGGGAGCAG ATCCGCGCCA AGAACCGCGA GGTGGAGGAG
ACGAGCCGGG CGCTGAAGCT GAAGGCCGAC GAACTGGAGC GGATCAGCAC CTACAAGTCC
GAATTCCTGG CCAACATGTC CCACGAACTG AGGACCCCCC TCAATAGCCT GCTGATCCTC
TCCTCTCTGC TGAAGGAAAA CCGGGAGCAC AACCTGACCG ACAAACAGGT GGAGTACGCA
GCCACCATCA ACAGCTCCGG CAACGACCTC CTTACCCTCA TCAACGATAT CCTCGATCTC
TCGAAGATCG AGTCGGGAAG GCTGGAGTTC AATTACGAGC AGATTCCGCT CCGCGCCCTC
TTCGACCAGC TCCGCACGAT GTTCTCCCCC CTCGCGGAGC AGAAGGGGCT GGACTTTGAT
GCGATCATCG AGGAGGGGGT CCCGGAAGAG ATAACCACCG ACGGCCAGCG GACCCAGCAG
ATCCTGAAGA ACCTCGTTTC CAACGCCTGC AAGTTCACCC GGGAGGGGAG GGTGGCCGTC
AGGGCGCATC TGCCCAATTC AGAGGAAAAT CCCCTGCCGG CCCCGGCCAT TGCCATTCAG
GTTTCCGACA CGGGAATCGG GATTTCTCCC GACAAGCATG ACCTTGTGTT CCAGGCGTTC
CAGCAGGCGG ACGGCACGAC GAGCCGGAAG TTCGGCGGCA CCGGGCTGGG GCTTTCCATT
TCGCGGCAAC TGGCGCGGGG GCTCCATGGC GACGTCCTTC TCGAAAGCGA AGAGGGGAAA
GGGAGCTCCT TCACCCTCTA TCTCCCGCTG GACCACGCTG CCCATGGGGA GGAGAGTCAA
ACGGCCGTGC CGCCGCCGGC GCCCCGGCTG CCTCCCGTCA CGGTGCCGCG GGGGAAGGAA
GTCTCCGGAA GGGAGGCGGA TGTTCAGCTC CCGACGCCGG TTCTGGCGGA CGACCGCGAG
AAGCTTCGTC CCGGCGAGAG GAGCATCCTG ATCATCGAGG ACGATCTCTC CTTCGCCGCC
ATCCTGATGG ATATGGTCCG TGATCGTGGC TTCCCGGCAA TGGTTGCCGG GGACGGTGAA
AGCGGCATTG CCCTTGCCGA CCATTACCTG CCGAGCGCCA TTGTGCTGGA CGTGATGCTC
CCCCATATCG ACGGCTGGGG GGTCATGAAG TGCCTCAAGG ACAGCCTGAG GACCCGGCAT
ATCCCGGTGC ACTTCCTCAC CTGCCTGGAA GACCGCCAGA AGGCACTGAC CATGGGCGCC
ATAGGATTTG TGACCAAGCC CGTGAACAGT GCTCAGCTTG ACGAGGTGTT CAGTACCATC
GAGCACTCCC TGGCCAAAAG CGTCAGGAAG CTCCTGATCG TCGAAGACGA CAGGAACGAG
GCAAAGAGCA TGGAGGCGCT GCTCGGAGTG CGCGATGTGG CCATCACGGT CACCGCGACC
GGAAGCGAGG CCATGGGGCT TTTGGCCGTC GAACCCTTCG ACTGCATCGT GCTTGACCTG
GGCCTTTCCG ACATGTCCGG CTTCGAGGTG CTGGAGAAGA TCCAGTCCCT TGACGAAAGC
CGGCGGATTC CGGTGATAAT CCATTCGGGC CGGGACCTTT CCCGGGAGGA CGAGCAGCGG
CTCCGCAACT ATGCCGAGAG CATCATCATC AAGGGGGCCA AGAGCCCCGA GCGGCTTCTG
AACGAGGTCT CGCTCTTTCT GCACCTGGTG GAGAGCGGCA TGGGACCCGA GAAGAAGAGG
ATGATCCGCG CGGCTCTCGA CGACGAGGCG CTGCTCGAGG GGAAAAAGGT TCTGATCGTG
GATGACGACA TGCGCAACAT CTTCTCCCTC TCCAGCGTTC TCGCGGAGAA AAAGATGATC
GTGCTTGAGG CGGAAAACGG CAGGGAGGCC CTGGAGCGTC TCAATGGAGA GCCCGGCATC
GATGTGGTGC TCATGGATAT CATGATGCCC GAGATGGACG GTTTTGCGGC TACCCGCGCC
ATCAGGAAAG ACCCGCGATT CGCCCGGCTC CCCATCATCG CCCTCACGGC CAAGGCCATG
AAGGGTGACC GGGACGAGTG CCTCAAGGCA GGGGCCAGCG ATTACATCCA GAAGCCGGTG
GATGCGGACA AGCTCCTTTC GCTGCTGCGG GTATGGCTGT ACGGTAGCTG A
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| Protein sequence | MGWYADLKIR NKLLLGYGTV IAFSSLIGYF GVTGLTEMKS HLDAMHDHLI PGIETAAMID
RHHQQHRRTF LNYLEENRLH RKELELKLHH EAIDIQESLK RYAKLSIYPA ERRLLDDVIT
ASKEYMDETA RLKSAADSGA DYETLTVDNA HLRTLFGDVE NRAKLLTQYS LKEGDEHLDQ
STAGYFNIRS WLISLLLGAI AIALAMAFFI TRSVADPIRV VLDAVRRMEE SGTEKARLAE
AIAAGDLTQD VAVSERLRID PETVARDEGG MMLRAVAGMS GIQASLDAAF SRMTDSLRRN
RQEEQARDWL KSGANELGAI LRGDRRLEEM VEKSLSFLCE YLGAGVGVLY LYNDRTRDLE
IAATYALARR EDMKKRFALG EGLVGEAAKE RRIIRLADVP PGYLPISSAI GEAKPLNIAA
VPLLHDNLLV GVVEIGSFRE FTARELEFLS RAQEGLSIGI NVNRSRKLVD ELLEQTQAQT
EELRVQQEEL QQTNEELEER AQMLEQQREQ IRAKNREVEE TSRALKLKAD ELERISTYKS
EFLANMSHEL RTPLNSLLIL SSLLKENREH NLTDKQVEYA ATINSSGNDL LTLINDILDL
SKIESGRLEF NYEQIPLRAL FDQLRTMFSP LAEQKGLDFD AIIEEGVPEE ITTDGQRTQQ
ILKNLVSNAC KFTREGRVAV RAHLPNSEEN PLPAPAIAIQ VSDTGIGISP DKHDLVFQAF
QQADGTTSRK FGGTGLGLSI SRQLARGLHG DVLLESEEGK GSSFTLYLPL DHAAHGEESQ
TAVPPPAPRL PPVTVPRGKE VSGREADVQL PTPVLADDRE KLRPGERSIL IIEDDLSFAA
ILMDMVRDRG FPAMVAGDGE SGIALADHYL PSAIVLDVML PHIDGWGVMK CLKDSLRTRH
IPVHFLTCLE DRQKALTMGA IGFVTKPVNS AQLDEVFSTI EHSLAKSVRK LLIVEDDRNE
AKSMEALLGV RDVAITVTAT GSEAMGLLAV EPFDCIVLDL GLSDMSGFEV LEKIQSLDES
RRIPVIIHSG RDLSREDEQR LRNYAESIII KGAKSPERLL NEVSLFLHLV ESGMGPEKKR
MIRAALDDEA LLEGKKVLIV DDDMRNIFSL SSVLAEKKMI VLEAENGREA LERLNGEPGI
DVVLMDIMMP EMDGFAATRA IRKDPRFARL PIIALTAKAM KGDRDECLKA GASDYIQKPV
DADKLLSLLR VWLYGS
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