| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2634 |
|---|
| Symbol | |
|---|
| ID | 3740212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2981375 |
|---|
| End bp | 2983093 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637779920 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_385578 |
|---|
| Protein GI | 78223831 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000159287 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGAG ACCACACAGC ACGCCCTGAA AGATGGCTCC TCGACACAGC CCGTGGGGTG
AGGGGGAAGC TTGCCCGCGC CGTGGGGTGG GCCTTCGTCG CCGGGTTTCT GACCGTCCCC
CAGGCGCGGC TCCTGGCGCT GGCCTGCCAT CGGGTGGTGA TCGAGAACGC CACCCTGGAC
GCCGTGCTTC CCCTGGCCGG CGCTGTCGCC GCCCTGGCTG CTGCCCGGGG GCTCCTGGTC
TTCTTCTCCG AGCGGCGGGC AGCGGCCGCC GCGGCCCGGG TCAAGGAGCA GGTGCGGAGC
CACCTCTACC GCAAGCTCCA GGCACTGGGG CCGGCGGGGC GTGCCGGCGA GGAGACCGGT
CCCCTCGTGG AGGCGGTGAC CGCAGGGGTC GAGGGGCTGG AGCTCTACGT GGCCCGCTTC
CTTCCCCACC TGGCCCTGGC GGCGGTGCTG CCACCAACGG CCCTCTTCTT CGTCTTTCCG
GCAGAGTGGC GGGCGGGTCT CGTCCTCCTC TTTTCCGCCC CCTTCATCCC GCTTCTCATG
GTCCTCATCG GCAGCGGCTC CGAGATCCTC AACCGCCGTC AGTGGGGGCG CCTCTCCCGC
ATGGCAGGGC ACCTCCTCGA CCTCGTCCAG GGGCTTCCCG ACCTGAAGAT CTTCGGCGCG
GCCCGGCGCG AGGCCGAGGC TGTGGCCCGG GTCTCCGAGG CGTATCGCCA GGGAACCATG
GCGGTGCTCC GGGTGGCGTT CCTCTCGGCC TTTACCCTGG AGTTTTTCGC CACCGTCGGT
ACGGCGGTGG TGGCGGTGGT GGTCGGCTTC CGCCTCCTGG GAGGGGGACT AAGCCTCGCC
GATGGGCTTT TCGTGTTGCT GCTGGCCCCC GAATTCTACC TGCCGCTGAG AACCCTCGGG
CTCTCTTACC ACGCCCGGAT GCAGGGAACA GCCGCCGCCG AGCGGCTTGT GCCGCTTTTG
TCTCTTCCCG GGCCCGAGGG GTACGGAGGC ACCCTGCCGG TTCAAGCGGG GCCGCCGGCC
ATCCGGTTCG AGGGAGTTAC CTTCCGCTAC GGCGGCGAGC GGGGAGGCGT GAGCGGCATC
GATCTGGAAT TGCCGGCCGG GAGCCTCACG GCCCTGGAGG GGGAGAGCGG CACCGGCAAG
AGCACCCTGG TGCGCCTCCT TGTGGGGCTG GCCCGTCCCG AGGCGGGGCG GATCACGGTG
AACGGCGCCG ATCTTGCCGA TCTGGACCCG GCTGCCTGGC GGAAGCGCCT CGCGTGGGTT
CCCCAGAGCC CTTTTTTCTT CAAGGGGACG ATCCGGGAGA ACCTCTGCCT CGGCCGTCCC
ACCGCCGACG GGGCGGAGAT CTGCGCCGCC CTGGAGGCTG CGGCAGCCGA CGCCTTTGTG
AATCGCCTGC CGCTGGGGCT CGACACGGAA CTGGGGGACC GGGGCGCCGG GCTCTCTGGG
GGGGAGCTCC GGCGCCTGGC CCTGGCTCGG GCGTTCCTGC GCGATGCTTC GCTGGTGGTT
CTTGACGAGC CCACCGCTGG CCTTGATCCG GAGAACGAGC GGCTGGTGGG GGAGGCCCTG
GAGCGGCTGG CCGCTGGGCG GACGGTGCTC GTCATCAGCC ACCGGGAAAA AACCGTCCGG
AGGGTGGCGC GGGTCGCCGT CATGGCTGGG GGGCGTCTTG AGCGGGTGGT GGCGCCGGCG
GAGTTCCTGG CCGCCATGGC GGGAGAGGTG GCGGCATGA
|
|---|
| Protein sequence | MSRDHTARPE RWLLDTARGV RGKLARAVGW AFVAGFLTVP QARLLALACH RVVIENATLD
AVLPLAGAVA ALAAARGLLV FFSERRAAAA AARVKEQVRS HLYRKLQALG PAGRAGEETG
PLVEAVTAGV EGLELYVARF LPHLALAAVL PPTALFFVFP AEWRAGLVLL FSAPFIPLLM
VLIGSGSEIL NRRQWGRLSR MAGHLLDLVQ GLPDLKIFGA ARREAEAVAR VSEAYRQGTM
AVLRVAFLSA FTLEFFATVG TAVVAVVVGF RLLGGGLSLA DGLFVLLLAP EFYLPLRTLG
LSYHARMQGT AAAERLVPLL SLPGPEGYGG TLPVQAGPPA IRFEGVTFRY GGERGGVSGI
DLELPAGSLT ALEGESGTGK STLVRLLVGL ARPEAGRITV NGADLADLDP AAWRKRLAWV
PQSPFFFKGT IRENLCLGRP TADGAEICAA LEAAAADAFV NRLPLGLDTE LGDRGAGLSG
GELRRLALAR AFLRDASLVV LDEPTAGLDP ENERLVGEAL ERLAAGRTVL VISHREKTVR
RVARVAVMAG GRLERVVAPA EFLAAMAGEV AA
|
|---|
| |