Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2630 |
Symbol | |
ID | 3740266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2977012 |
End bp | 2978649 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637779916 |
Product | ABC transporter-related protein |
Protein accession | YP_385574 |
Protein GI | 78223827 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000104931 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAGCG CATCGAACGT TACCCTCTCC TATGGAAAGA GGGTTCTCTT CAAGGACGTT AACATCAAGT TTACCCCCGG CAACTGCTAC GGCCTCATCG GCGCCAACGG CGCCGGGAAA TCCACCTTCC TCAAGATCCT CGCCGGCGAG GTGGAGGCGG ACAAGGGGGA GATCTCCGTG GGCTCAGGCG AGCGGATCGC GGTGCTGCGC CAGGACCAGT TCGCCTTTGA CGAGGAGGTG GTCTTCAATA CCGTCATCAT GGGGCACGAG CGGCTCTACA AGGTGATGGC TGAGCGGGAG GAGATCTACT CCAAGGGTGA TTTCACCGAG GAGGACGGCA TCCGCTCGGC GGAGTTGGAG GGGGAGTTCG CCGAGATGAA CGGCTACGAG GCCGAGAGCG AGGCGGCGGT GCTCCTGAAC GGCCTCGGCA TCCCCGAGGA ATTGCGCCAT AAAAAGATGA AGGAGCTGGA ACCGGGAGAG AAGGTGCGGG TGCTCCTGGC CCAGGCCCTC TTCGGCAATC CCGACGTGCT CCTTCTGGAC GAGCCCACCA ACAACCTGGA CCTGAAATCC ATCACCTGGC TGGAGGATTT CCTCTCCCGC TTCCAGAACA CGGTCATCGT GGTCTCCCAC GACCGGCATT TCCTGAACCA GATCTGCACC CACGTGGCCG ACATCGACTT CGGCATGATC AAGGTCTACG TGGGGAACTA CGACTTCTGG TACCAGGCGA GCCAGCTGAC CCTGCGGCAG AAGCAGGAGG AGAACCGCAA GTCCACCGAG AAGGCCAACG AGCTGAAGGA GTTCATCCAG CGCTTCAGCT CCAACGCCTC CAAGGCCAAG CAGGCCACCT CCCGGAAGAA GCTCCTGGAG AAGCTGACCC TGGAGGAGAT GCCGGTTTCC TCCCGCAAGT ACCCCTACGT GGTCTTCAAG CCCGAGCGGG CCTGCGGCGA CATCATCCTG GAGATCCAGG GGCTCTCGAA GTCTGTGGAT GGTGTGCAGG TGCTTAACAA CCTGGACCTC ATCGTCCGCA AGGGGGACAA GATCGCCTTC GTGGGGGCTA ACAGCCAGGC CAAGACCACC CTTTTCCAGA TTCTGACCGG GGAACTGGAG CCGGATGCGG GAACCTTCCG CTGGGGGGTG ACCATCACCC ATTCCTATTT CCCCAAGGAG AACAGCGCCT TTTTCGAGGG GGACCTGAAC CTCATCGAGT GGCTTGGCCA ATACTCACCT CCCACTGAAG GGGAGAGCTT CGCACGGGGG TTCCTGGGGC GGATGCTCTT CTCCGGGGAC GAGGCCACCA AGAAGACCAG TGTGCTCTCC GGGGGGGAGC GGGTCCGCTG CATGCTCTCC CGGATGATGC TCACGGGCGC CAACGTCCTC ATGCTGGACG AGCCCACCAA CCACCTGGAC CTGGAGTCCA TCACCGCCCT CAACAACGGG CTCATCGCCT ACCCGGAGGT GATCCTCTTC GCCTCCCACG ACCACGAGTT CGTCTCCACC GTGTCGAACC GGATCGTGGA GCTCACCCCT GGCGGGGTCA TCGACCGGGT CATGAGTTTC GACGACTTCC TGGAGGATGA GGGGGTTGCC CGGGAGCGGG ACGAGTTGTA TCACGGCCAC GTGGAGGCGA GCCTGTAA
|
Protein sequence | MISASNVTLS YGKRVLFKDV NIKFTPGNCY GLIGANGAGK STFLKILAGE VEADKGEISV GSGERIAVLR QDQFAFDEEV VFNTVIMGHE RLYKVMAERE EIYSKGDFTE EDGIRSAELE GEFAEMNGYE AESEAAVLLN GLGIPEELRH KKMKELEPGE KVRVLLAQAL FGNPDVLLLD EPTNNLDLKS ITWLEDFLSR FQNTVIVVSH DRHFLNQICT HVADIDFGMI KVYVGNYDFW YQASQLTLRQ KQEENRKSTE KANELKEFIQ RFSSNASKAK QATSRKKLLE KLTLEEMPVS SRKYPYVVFK PERACGDIIL EIQGLSKSVD GVQVLNNLDL IVRKGDKIAF VGANSQAKTT LFQILTGELE PDAGTFRWGV TITHSYFPKE NSAFFEGDLN LIEWLGQYSP PTEGESFARG FLGRMLFSGD EATKKTSVLS GGERVRCMLS RMMLTGANVL MLDEPTNHLD LESITALNNG LIAYPEVILF ASHDHEFVST VSNRIVELTP GGVIDRVMSF DDFLEDEGVA RERDELYHGH VEASL
|
| |