| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2600 |
|---|
| Symbol | |
|---|
| ID | 3739985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2950044 |
|---|
| End bp | 2950952 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637779886 |
|---|
| Product | respiratory-chain NADH dehydrogenase, subunit 1 |
|---|
| Protein accession | YP_385544 |
|---|
| Protein GI | 78223797 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA TTATCATCCA CTGCGCAGTG GCGCTCCTGT TGCCGCCACT GTTGCTCGGG
GTTATCGGCA AGACCAAGGC GGCCTTTGCC GGAAGGGTTG GAGCGCCCTA TCTGCAGCCC
TATTTCGACC TGATCAAGCT CTTCCGCAAG GGATCGGTCT TTAGTGAGAC CACCACCTGG
GTTTTCCGTG CCGGCCCGTT GATAACACTC TCCGCAGCGC TTATCGCAGT GTTGCTGATC
CCGCTGGGCC GCCATGTCGC GCCACTTTCT TTCAGTGGCG ATCTCATCCT CTTTGCCTAC
CTTTTCGGAT TGTCCCGGTT CTTTACCACC ATTGCGGCTC TGGATACCGG TTCTAGTTTC
GAAGGGATGG GAGCGGCACG TGAAGTTACG TTTTCCTGCC TTGCCGAACC GACCCTCTTC
TTTTCCCTGC TGACTCTGGC CCGCATAAGC AAGTCGCTTT CCCTGTCAAC GATACTCACC
CATCCCACGC CCGCCATCTG GCTTGCCGCC GGGGCGAGCA TGCTGTTGCT GGTGGGGGCG
CTGTTCATCA CCCTTCTGGC GGAGAACTCC CGCATCCCCT TCGACGATCC CAACACGCAC
CTCGAATTGA CCATGATCCA TGAAGTCATG GTCCTTGATC ACAGTGGCCC CGCCTTCGGG
ATCATCCTCT ACGGAGCGGC GCTGAAACTG TTCATTCTCG GAGCGGTCTT TGTAAATATC
GCCTTCCCTG TCGCCACCGG AAATGCGCTT CTCGACTGGG GCATCTTCAT TGTCGCCATG
CTTGTGCTGG CGGTGGCAAT CGGCGTTGTC GAGTCGGTGA TGGCCCGGTT GCGTCTGGTC
CGCGTTCCGC AACTGCTGGT CGGAGCCACT ATCCTGTCCG CCTTTGCCAT GCTGCTGGTA
TTGAGGTAG
|
|---|
| Protein sequence | MTDIIIHCAV ALLLPPLLLG VIGKTKAAFA GRVGAPYLQP YFDLIKLFRK GSVFSETTTW
VFRAGPLITL SAALIAVLLI PLGRHVAPLS FSGDLILFAY LFGLSRFFTT IAALDTGSSF
EGMGAAREVT FSCLAEPTLF FSLLTLARIS KSLSLSTILT HPTPAIWLAA GASMLLLVGA
LFITLLAENS RIPFDDPNTH LELTMIHEVM VLDHSGPAFG IILYGAALKL FILGAVFVNI
AFPVATGNAL LDWGIFIVAM LVLAVAIGVV ESVMARLRLV RVPQLLVGAT ILSAFAMLLV
LR
|
|---|
| |