| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2580 |
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| Symbol | |
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| ID | 3739930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2926792 |
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| End bp | 2932470 |
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| Gene Length | 5679 bp |
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| Protein Length | 1892 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637779866 |
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| Product | UvrA family protein |
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| Protein accession | YP_385524 |
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| Protein GI | 78223777 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.603689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACG AATCGATTTC CATCCGCAAC GCCCGCCAGA ACAACCTCAA AAATCTCGAT
CTCGACCTTC CCCTCGGCGA ACTGATCGTC GTCACCGGCG TCTCCGGGTC GGGGAAGTCG
TCCCTGGCCT TCGACACGGT CTATGCCGAG GGGCAGCGCC GCTACGTGGA GACCTTCTCC
CCCTACGCCC GCCAGTTCCT GGACCGGATG GACCGCCCGG CGGTGGACCG GATCGACGGG
ATCCCCCCGG CCATCGCCAT TGACCAAACC AACCCGGTCC GCACCTCCCG CTCCACCGTG
GGGACCATGA CGGAGCTGAA CGACCACCTG AAGCTCCTCT TCGCCCGGGG GGCGCGGCTC
TTCTGCCGCG GCTGCGGCCG GCCGGTGCGG CGCGACACGC CGGAGAGCAT TGTTGATGAG
CTGCTGGCGC GAAACCCTCA CCCGGCCTCC GGCCACCCTC TCCCCAAGGG CGAGGGTAAC
GATCTCTCCC TCTCCCCCTC TGTCCTCGTC ACCTTCCCGG TACCGGTGCC GGCCAACTTC
TCCGCCGACG AGGTGAAGGG GTTCCTGGCC GGCCAGGGGT ACACCCGCAT CCACCGGGAG
GAGGACGGCA TCCTGGAGGT GATCCAGGAT CGGACGCGCC TGGCCCCGGA GAACCGCTCG
CGGCTGGTGG AGGGTATGGA GGCGGCGCTG CGGGTCGGCC ACGGGAGGGT GCTCGTTTAC
CCCTTGGGCG GCGACGGTAC ACCGGGGGAG CCGCGGCGGT TCTCTAGTGA TCTCCACTGC
CCTGACTGCG ACATCTCGTA CCACGATCCG GCGCCCCACC TTTTCTCCTT CAACTCGCCG
GTGGGGGCCT GCGCCACCTG CCGGGGGTTC GGCCGGGTGA TCGGCATCGA CCACGGCCTG
GTGATCCCTG ACGAGTCTAG GACCCTGGCC GGCGGCGCGG TGAAGCCGTG GCAGACCGAG
AGCTACCGGG AATGCCAGGA CGACATGATG ACCTTCGCCG CCAAGCGGGG CGTCCCCGTC
AATGTGCCGT GGCGTGAGCT GACGGAGGAA CAGCGCCACT GGGTGCTTGA GGGGGAGGGC
TCGTGGGATG AGGGGCTCTG GTACGGGGTG CGGCGCTTCT TCGACTGGCT CGAAACCAAG
AGCTACAAGA TGCATATCCG GGTACTCCTC TCCAAATACC GCGCCTACAC CCTCTGTCCC
GCCTGCCGGG GGGCGCGGCT GAGCCCCGAT GCGCTCCTCT GGCGACTCGG GACCAGAGAG
GAGGCCGACA AGGTGCTTTC CCCGGAACTC CGCTTTCGCC CCGAGGGGAT GGAGCTGTCC
GATGAGATTC TGCGTAATCT GCCCGGCCTC ACCATCCACG ATGTCATGCT CCTCCCCCTG
GACCGCTGCG CGGAGTTCTT CGGCGCCCTG GCGCTGCCGC CCCCCCTGGA CGAGGCGGCG
GAGCTGCTCC TGCGGGAGAT CCGCGCCCGC CTCGGCTACC TGGGGACGGT GGGGCTCGGC
TACCTGACCC TGGACCGCCA GTCCCGGACC CTCTCCGGCG GCGAGGTGCA GCGGATCAAC
CTGACCACGG CCTTGGGGAC CTCCCTCGTC AACACCCTCT TCGTGCTGGA CGAGCCCTCC
ATCGGCCTCC ACCCCCGGGA CATGGGGCGG GTGATCGGAG TCTTGCGGCA GCTGCGGGAC
GCCGGGAACA CGCTGCTGGT GGTGGAGCAC GACCCCCAGG TGATGCTCGC CGCCGACCGG
CTGTTGGACA TGGGCCCGGG GCCGGGGGAG CGGGGAGGGG AGGTGGTCTT CTTCGGGACG
CCGGGGGCGA TTCTGGGGGA GAAGCGGTCG TTGACGGGGG AGTATCTGGC GGGGCGGCGG
CGGATCGCCC CTCACCTGGC CTTCGGCCAC CCTCTCCCGG AGGGCGAGGG TTATGGAAAC
CCCCTCTCCC TCCGGGAGAG GGTTGGGGTG AGGGCAGAGG AGAGGGAGAA TGTCGGATAC
GTGGAAATCC TCGGCGCCGC CGCCCACAAC CTCACGGGGA TCGACGTCCG CGTCCCCCTC
AATCGCCTCG TCTGCATCAC CGGCGTTTCC GGCTCGGGCA AGTCGACCCT GGTCCAGGAT
GTGCTCCACC GGGGGCTCCT GAAGCTGAAA GGAAAGCCGA CGGAACTGCC GGGGGCCCAC
GCCGCCATTA ACGGGGCGGA GCTGATCGGC GACGTGGTGC TGGTGGACCA GTCCCCCATC
GGCAAGACGA CCCGCTCCAA CCCGGCCAGC TACGTGGGGG CCTTCGACGC CATCCGCAAG
CTCTTCGCCG CCGAGCCCCT GGCCAAGGAG CGAGGGTACA CCACCGGCAC CTTCAGCTTC
AACGCTGGCA CCGGGCGTTG CCCCGCCTGC GGCGGCAACG GCTTCGAGCA TGTGGAGATG
CAGTTCCTCT CCGACGTCTA CCTGCGCTGT CCCGACTGCG ACGGCCGCCG CTACCGCCCC
GAGGTGCTGG AGGTGCGACT CGTGCCGGCC GGGGACGGGC GCCCCGTCTC CATCGCTGAT
GTGCTGGAGA TGACCGTGAC CGAGGCGGTG TCTTTCTTTG CCGGTCACCG GGAGGTGCTC
CGGGGTCTCG AACCCCTGGA GGCCGTCGGC CTCGGGTATC TCCGCCTCGG CCAGCCGGTG
CCGACCCTTT CCGGCGGCGA GGCCCAACGC CTGAAGCTGG CCGGGCACCT GGCCCAAGTG
GGAGGTCGGA AGCGGGTGGA GTCAGGGAAC CTCTTCCTCT TCGACGAGCC CACCACCGGC
CTCCACTTCG AGGACATCGC CCGGTTGCTG GCCGCCTTCC GACGGCTCCT TGAGGCCGGC
GACTCCCTGG TGGTGATCGA GCACAACCTG GATGTCATCG CCGCCGCCGA CTGGCTCCTG
GACCTGGGAC CCGAGGGGGG CGACGGCGGC GGGCGGCTGG TCTGCGCCGG CACCCCGGAC
GAGGTGATGG TGTGCGATGA GAGCCACACC GGTCGGGCCC TGCGGGAGTA CGGGGAGGAA
CTGGCCGCCC TGGTGAGGGA GTCGACCCGG ACCGTGGCAG AGGCGCCCCC CGCCGTGGTG
CCGGACCGCT CCATCCGTAT CGTCCACGCC CGGGAGCACA ACCTGAAGAA CGTCACCATC
GCCGTCCCCC GGGACCGCTT CACGGTCATC ACCGGCATCT CGGGGAGCGG CAAGTCCACC
GTCGCCTTCG ACATCCTCTT CGCCGAGGGG CAGCGGCGCT ACCTGGAATC CCTCAACGCC
TACGCCCGCC AGTTCGTCCA GCCGGCGGCC CGTCCCGACG TGGACGCGGT CCTCGGCATC
CCCCCCACGG TGGCCATCGA GCAGCGGACA AGCCGGGGGG GGCGCAAGAG CACCGTGGCG
ACCCTGACGG AGATCTACCA CTTCCTCCGG CTCCTCTTCG TGAAGCTCGG GGTGCAGCAC
TGCCCCGACT GCAGCATCCC CATCACCCCC CAGACCCCGG ATGCCATCGT GGCCCGGCTC
CTGCGTGATT TCCGGGGGAA GCGGGTGGCG CTCCTGGCGC CGCTGGTCAC GGCCCGTAAG
GGGTACTACA CCGACTTGGC CAAGTGGGCC GCCGGGAAAG GGTTTACAAG CCTCCGGGTG
GATGGCGTCA TGACCCCCGT GGAACCGTGG CCGCGGCTCG ACCGCTTCCG GGAACATGAC
ATCGACCTTC CCGTGGGGGA GATCACGGTG GCGGCGAAAG GGGAGGGGGC GCTGCGGGAG
CTGCTGGACC GGGCCCTCGC CTTCGGCAAG GGGGTGGTGC GGGTGGCGGT GGCGGGGGGG
GAGGAACAGC TCTACTCGAC GCTCCGCGCC TGCACCTCCT GCGGCCAGAG TTTTCCTGAG
CCCGACCCGC GGCTCTTCTC CTACAACTCC CGCCATGGCT GGTGCCCCCG CTGCTTCGGC
ACGGGGCTGG AGATCCCCGG CTTCGACGCG GAGCAGTCCG GCGAGGAGAT CTGGTGGAAC
GAGTGGTTCG AGGGTGAGGA GCGGACCTGC TCCGCCTGCC ACGGCGCCCG CCTCAACCCC
GAGGCCCTGG CGGTCCGCTT CCGGGACCGG AACATCGCCG AGTTGACGGC CCTTACCGTG
ACCCAGGCGG CTTTCTTTGT GCGCGACCTG GGGCTGGAGG GGCGGGAGGC GGCCATCGCC
CGGGATATCG TGGCCGAGAT CACGACGCGG CTCGCCTTCC TGGGCGAGGT GGGGCTCGGC
TACCTCGCCC TGGACCGGGC GGCACCCACC CTCTCCGGTG GCGAGGCCCA GCGGATCAGG
CTCGCAGCCC AGCTGGGCTC GAACCTGCGG GGGGTCTGCT ACATCCTCGA TGAGCCCACC
ATCGGCCTTC ACCCCCGGGA CAACCGGATG CTCCTGGACA CCCTGCGGAA GCTGGAGGGG
AAGGGGAACA CCATCGTGGT GGTGGAGCAT GACGAGGAGA CCATCCGCCG GGCTGAGCAC
GTCATCGACC TGGGCCCCGG CGCCGGCGTC AACGGCGGTC TGGTGGTGGC CGAGGGAACC
CTGGAACAGG TGATGGCGGC CCCGGACTCC CTCACCGGCC GCTACCTGGC GGAGCCCCTG
CGTCATCCCC TCGTGGAGCG GCGTCCCGCA CCGACACCGG AGGAGCCGAG TATCCAGGTG
TTGGGGGCCA TCCTCCACAA CCTGCAAGGG GTCGACGTCG CCTTCCCGCT CCGGCGGCTC
GTCTGCGTCA CCGGCGTCTC GGGGAGCGGC AAGAGCACCC TGGTGCGCAA CGTCCTCCAC
TCCTCCATCC AGGGGCTCCT GGCCCACGGC AAGGGAGCCC ATACCGTGGC CGGGTGTCGG
GAAATCACAG GGTGGGAGCA GCTCACTCGC GTCCTGGAGG TGGACCAGAC CCCCATCGGC
AAGACCCCCC GGTCGTGCCC CGCCACCTAC GTGGGGTTCT GGGACGCCAT CCGGAAACTC
TACGCCGGCA CCACCGAGGC GCGGCTCCGG GGGTACGGCC CCTCCCGCTT CTCCTTCAAC
GTGAAGGGGG GGCGGTGCGA CGAGTGCGAG GGGCAGGGGG TGAAGACCAT TGAGATGAGC
TTCCTCCCCG ACGTGAAGGT GGCGTGCGAG GTCTGCGGGG GCTTGCGCTT CAACGCCGAG
ACCCTCATGG TCCGCCACCG GGGGAAATCC ATCGGCGACC TCCTGGCCAT GAGCGTGGAC
GAGGCGGTCG GGTTCTTCGC CGCCCACCGG GCCATCCTCC ACCCGCTTCA GCTGCTGCAG
GACGTGGGAC TGGGGTATCT GACCCTGGGG CAGCAGAGCC CCACCCTTTC CGGAGGCGAG
GCCCAGCGGA TCAAGCTCGT CACCGAGCTG GCCAAGGCGA AGCCGGTGAA GGACGCGCTC
CGGGTGCCGC GAAACGCACC CCACTCCCTC TATATCCTGG ACGAGCCCAC CATCGGCCTC
CACATGGCCG ACGTGGAGAA ACTGGTCCGG GTCCTCCACC GGCTGGTGGC GGCGGGGAAT
TCGGTGGTCG TCATCGAGCA CAACCTGGAC GTCATCGCCG AGGCCGACTG GCTCATGGAC
CTGGGGCCCG AGGGGGGGGA CGGCGGCGGG ATGGTTGTTG CCCAGGGAAC GCCGGAGGAG
GTGGCCCGTA TGGGCGGCGT TTCCCACACG GGGCGGATAC TTGGGGAGTT CCTGCGGGAG
CGGGGATCGG AAGGGGAAGT AAAGCGGACA CGAGAGTGA
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| Protein sequence | MSHESISIRN ARQNNLKNLD LDLPLGELIV VTGVSGSGKS SLAFDTVYAE GQRRYVETFS
PYARQFLDRM DRPAVDRIDG IPPAIAIDQT NPVRTSRSTV GTMTELNDHL KLLFARGARL
FCRGCGRPVR RDTPESIVDE LLARNPHPAS GHPLPKGEGN DLSLSPSVLV TFPVPVPANF
SADEVKGFLA GQGYTRIHRE EDGILEVIQD RTRLAPENRS RLVEGMEAAL RVGHGRVLVY
PLGGDGTPGE PRRFSSDLHC PDCDISYHDP APHLFSFNSP VGACATCRGF GRVIGIDHGL
VIPDESRTLA GGAVKPWQTE SYRECQDDMM TFAAKRGVPV NVPWRELTEE QRHWVLEGEG
SWDEGLWYGV RRFFDWLETK SYKMHIRVLL SKYRAYTLCP ACRGARLSPD ALLWRLGTRE
EADKVLSPEL RFRPEGMELS DEILRNLPGL TIHDVMLLPL DRCAEFFGAL ALPPPLDEAA
ELLLREIRAR LGYLGTVGLG YLTLDRQSRT LSGGEVQRIN LTTALGTSLV NTLFVLDEPS
IGLHPRDMGR VIGVLRQLRD AGNTLLVVEH DPQVMLAADR LLDMGPGPGE RGGEVVFFGT
PGAILGEKRS LTGEYLAGRR RIAPHLAFGH PLPEGEGYGN PLSLRERVGV RAEERENVGY
VEILGAAAHN LTGIDVRVPL NRLVCITGVS GSGKSTLVQD VLHRGLLKLK GKPTELPGAH
AAINGAELIG DVVLVDQSPI GKTTRSNPAS YVGAFDAIRK LFAAEPLAKE RGYTTGTFSF
NAGTGRCPAC GGNGFEHVEM QFLSDVYLRC PDCDGRRYRP EVLEVRLVPA GDGRPVSIAD
VLEMTVTEAV SFFAGHREVL RGLEPLEAVG LGYLRLGQPV PTLSGGEAQR LKLAGHLAQV
GGRKRVESGN LFLFDEPTTG LHFEDIARLL AAFRRLLEAG DSLVVIEHNL DVIAAADWLL
DLGPEGGDGG GRLVCAGTPD EVMVCDESHT GRALREYGEE LAALVRESTR TVAEAPPAVV
PDRSIRIVHA REHNLKNVTI AVPRDRFTVI TGISGSGKST VAFDILFAEG QRRYLESLNA
YARQFVQPAA RPDVDAVLGI PPTVAIEQRT SRGGRKSTVA TLTEIYHFLR LLFVKLGVQH
CPDCSIPITP QTPDAIVARL LRDFRGKRVA LLAPLVTARK GYYTDLAKWA AGKGFTSLRV
DGVMTPVEPW PRLDRFREHD IDLPVGEITV AAKGEGALRE LLDRALAFGK GVVRVAVAGG
EEQLYSTLRA CTSCGQSFPE PDPRLFSYNS RHGWCPRCFG TGLEIPGFDA EQSGEEIWWN
EWFEGEERTC SACHGARLNP EALAVRFRDR NIAELTALTV TQAAFFVRDL GLEGREAAIA
RDIVAEITTR LAFLGEVGLG YLALDRAAPT LSGGEAQRIR LAAQLGSNLR GVCYILDEPT
IGLHPRDNRM LLDTLRKLEG KGNTIVVVEH DEETIRRAEH VIDLGPGAGV NGGLVVAEGT
LEQVMAAPDS LTGRYLAEPL RHPLVERRPA PTPEEPSIQV LGAILHNLQG VDVAFPLRRL
VCVTGVSGSG KSTLVRNVLH SSIQGLLAHG KGAHTVAGCR EITGWEQLTR VLEVDQTPIG
KTPRSCPATY VGFWDAIRKL YAGTTEARLR GYGPSRFSFN VKGGRCDECE GQGVKTIEMS
FLPDVKVACE VCGGLRFNAE TLMVRHRGKS IGDLLAMSVD EAVGFFAAHR AILHPLQLLQ
DVGLGYLTLG QQSPTLSGGE AQRIKLVTEL AKAKPVKDAL RVPRNAPHSL YILDEPTIGL
HMADVEKLVR VLHRLVAAGN SVVVIEHNLD VIAEADWLMD LGPEGGDGGG MVVAQGTPEE
VARMGGVSHT GRILGEFLRE RGSEGEVKRT RE
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