| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2570 |
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| Symbol | |
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| ID | 3738874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 2917648 |
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| End bp | 2919273 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637779856 |
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| Product | fumarase |
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| Protein accession | YP_385514 |
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| Protein GI | 78223767 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.013592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.472366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCA AGCCGTTCGT TTACCAGGAA CCCTTCCCCC TCGAGAAAGA TGAGACGTCG
TACTACAAGA TTCCCGACTC GGAGAAGTAT GTCAGCGTCG CAACTTTCGA AGGGAAAGAG
GTCCTCAAGG TCGATCCCGA GGCACTCACC GTCCTGGCCA ACACGGCCAT GAGGGACGTC
TCCTTCCTGC TCCGCCCCGA GCACAACGAG TCGGTGGCCA AGATCCTCCG GGATCCGGAA
GCCTCCCAGA ACGACAAGGG GGTTGCCCTG GCATTCCTGC GGAACGCCGA GATCGCCGCC
AACTTCGAGC TCCCCCTCTG CCAGGACACC GGCACCGCCA CCGTCGTGGC CAAGAAAGGG
CAGCAGGTTT GGACCGGCGG AAAGGACGAG GAGTTTCTCT CCAAGGGGGT CTACAAGACC
TACACCGAGG AAAATCTCCG CTACTCCCAG ACCGTGGCCC TGGACATGTA CAAGGAAGTC
AACACCGGCA CCAACCTGCC GGCCCAGATC GACATCCAGG CTGTGGACGG CGATTACTAC
AAGTTCCTCT TCATGGCCAA AGGGGGGGGC TCCGCCAACA AGACCATGCT CTACCAGGAG
ACCAAGGCAC TCCTTACCCC GGACAGCCTG CTCAAGTTCC TGGTGGGCAA GATGAAGTAC
CTGGGAACCG CCGCCTGCCC GCCGTACCAC ATCGCCGTCG TGGTCGGCGG TACCTCGGCC
GACGCCTGCA TGAAGGCGGT CAAGCTCGCC TCCGCCAAGT ACCTTGACGC CCTCCCCACC
ACGGGGAACG AGCACGGCCG GGCCTTCCGC GACGTGGAAC TGGAGGAGAA GCTTCTCCAA
GAGGCCTACA AGCTCGGCAT CGGCGCCCAG TTCGGCGGCA AGTACTTCGC CCATGACGTA
CGGGTCATCC GGCTTCCCCG CCACGGCGCC TCCTGCCCCG TGGGGATGGC GGTCTCCTGT
TCCGCCGACC GCAACATCAA GGCCAAGATC ACCCAAAACG GCCTCTTCGT CGAGGAACTG
GACCGCAATC CGAGCCGACT CATTCCCGAG CAGTACCGCG GCAAGCATGA GCACGGGGTC
AAGATCGACC TGAACCGCCC CATGAAGGAG ATCCTGGCCG AACTGAGCAA GCACCCGGTT
TCCACGCCGC TGCTGCTGAA TGGCACCATC GTGGTGGGGC GCGACATCGC CCACGCCAAG
TTCAAAGAGA TTCTCGACAG CGGCAAACCG CTCCCCGACT ATCTCAAGAA TCATCCGATC
TACTACGCCG GACCGGCCAA GACCCCGGCT GGCAAGCCTT CCGGCTCCTT CGGCCCCACC
ACTGCCGGCC GCATGGACTC CTACGTGGAT CTTCTCCAGG CGAACGGCGG CTCCATGATC
ATGATCGCCA AGGGGAACCG GAGCCAGCAG GTGACCGATG CCTGCAAGAA GCACGGCGGC
TTCTACCTGG GCTCCATCGG CGGCCCTGCC GCGGTCCTGG CCGAGGAGAA CATCAAGAAG
GTCGAGTGCA TCGACTTCCC CGAACTGGGG ATGGAAGCGG TCTGGAAGAT CGAGGTCGAG
AACTTCCCGG CCTTCATCCT GGTGGATGAC AAGGGGAATG ACTTCTTCAA GCAGTTGGGT
CTGTAG
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| Protein sequence | MSTKPFVYQE PFPLEKDETS YYKIPDSEKY VSVATFEGKE VLKVDPEALT VLANTAMRDV
SFLLRPEHNE SVAKILRDPE ASQNDKGVAL AFLRNAEIAA NFELPLCQDT GTATVVAKKG
QQVWTGGKDE EFLSKGVYKT YTEENLRYSQ TVALDMYKEV NTGTNLPAQI DIQAVDGDYY
KFLFMAKGGG SANKTMLYQE TKALLTPDSL LKFLVGKMKY LGTAACPPYH IAVVVGGTSA
DACMKAVKLA SAKYLDALPT TGNEHGRAFR DVELEEKLLQ EAYKLGIGAQ FGGKYFAHDV
RVIRLPRHGA SCPVGMAVSC SADRNIKAKI TQNGLFVEEL DRNPSRLIPE QYRGKHEHGV
KIDLNRPMKE ILAELSKHPV STPLLLNGTI VVGRDIAHAK FKEILDSGKP LPDYLKNHPI
YYAGPAKTPA GKPSGSFGPT TAGRMDSYVD LLQANGGSMI MIAKGNRSQQ VTDACKKHGG
FYLGSIGGPA AVLAEENIKK VECIDFPELG MEAVWKIEVE NFPAFILVDD KGNDFFKQLG
L
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