Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2566 |
Symbol | |
ID | 3738870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2913558 |
End bp | 2914865 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637779852 |
Product | hypothetical protein |
Protein accession | YP_385510 |
Protein GI | 78223763 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000269653 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0546578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAAT ACAATCCTTT GAAACAGATT CCTGCGACCG CCGGTTATGG TAAGGGCGAC GTCTTCGTCC TATTCGGCGA ACTCTTCGGC CGGGGGTACG CCAACGGCAT CGTCGACGAG GCAAAAAAAG CCGGCATGAC CATCATCGGT GCCACCGTGG GGCGCCGCGA CAACAACGGA CCGCTCCGTC CCCTCACTCC CGAGGAGCTT GCCGAGGCCG AGGCGAACCT TGGTGGGAAG ATCATCAACG TGCCGCTGGA AGCCGGGTTC GACCTGGAGC CGGCCGCCGA CGGCCTCACC CCCGCTGACC GCCTCAAGGG GGTAAAGCCC GACACGGTGG TGGAGACGCG GCTCGACATG GCCGCCATCG AGGAGTCGCG GCAGAAGGGG CTCGCCCGCT TCCGGGAGAA TCTTGCTCTC TTCGCCAAAG ATCTGGACGG ACTCATCCCG GCCGGGGCCA ACGTTCTCAT TGCGCACACC ATGGCTGGTG GCATCCCCCG GGCCAGGACC CTCATGCCAA TCCTGAACCG GGTCTTCAAG GGGCAGGGAG ACCGCTACCT GGCGTCAGGA CCCTTCTGGA AATCCGATGT GGGGCAGCTC TGCTCCCTCT CCTTCGACGA GGTGACCGCC GACACCTTCG GCGCCCTCAT CGCCGCCACC GCTGGGCTCC GGAGTCGGGT GGAGGGGGCC GGTTCCCGCA TTTCCTATTC GGCCTTCGGC TACCACGGCT GCGCGGTGCT CATCGGCGGA GAATACCGGT GGCAGTCCTA CACCCCCTAC CTCCAGGGAT GGGCCAAGAT TCGCCTGGAG GAGGTCGCCA CGAAGGCCTG GCAGGAGGGG GTGAAGGCCA CGGTTTACAA TTCCCCCGAG ATCCAGACCA ACTCCAGCGC CCTCTTTCTG GGGGTGGAAA TATCCCTCTA CCCGCTGCTG GCGGCCCTGC GGAAGGAAGG GGACGGACCC GCGGCCACGG CCATATGGGA TGCCTGCCAG GGGCTCCTGA AGGAAGGGGA GACCCTTGAC GCTCTCCTAG CCAAGGCCGA TGCCTACCTC TCGTCGCCGG TCCTGAACCC CTTCGGGACC TATGAGCAGT GGCCCCACCA CAATACCGCG GAGCAGGCGA GCCTCATGCT CACCGTCTCC GACGAGCTTA TGACCATGAG CGCCGACCCC AAGAACGTGG TCTGCGCTGA ACTCTCGAAA TCGGTCTTCC AGGCGGTGGG ACGCCTCATG TTCGATCATT CCTGGAGCCC CCAGGCGCCG GTAGTCTGGC TGAACCACGA TACCATCGCC CGCCGGCTTA TTAACTGA
|
Protein sequence | MTQYNPLKQI PATAGYGKGD VFVLFGELFG RGYANGIVDE AKKAGMTIIG ATVGRRDNNG PLRPLTPEEL AEAEANLGGK IINVPLEAGF DLEPAADGLT PADRLKGVKP DTVVETRLDM AAIEESRQKG LARFRENLAL FAKDLDGLIP AGANVLIAHT MAGGIPRART LMPILNRVFK GQGDRYLASG PFWKSDVGQL CSLSFDEVTA DTFGALIAAT AGLRSRVEGA GSRISYSAFG YHGCAVLIGG EYRWQSYTPY LQGWAKIRLE EVATKAWQEG VKATVYNSPE IQTNSSALFL GVEISLYPLL AALRKEGDGP AATAIWDACQ GLLKEGETLD ALLAKADAYL SSPVLNPFGT YEQWPHHNTA EQASLMLTVS DELMTMSADP KNVVCAELSK SVFQAVGRLM FDHSWSPQAP VVWLNHDTIA RRLIN
|
| |