Gene Gmet_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2562 
Symbol 
ID3738866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2908697 
End bp2909788 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content65% 
IMG OID637779848 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_385506 
Protein GI78223759 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00117213 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCCGG AAAGCCCCAA CGAAGCGTTC CTTGCCACCA TCATCGACAG CGTCGGCGAC 
GGGGTCATCG TCATCGACCT GGGGGGGCGG ATCACCCTCA TGAACCCTGC GGCCGAGGAG
ATCATCGCCA TCTCCCGGCG CCAGGCCATG GGGCACCCCT TCGCGGCCCT CCTCGGCAGT
CAGGAGATTC TGGTGGATAT GGTCGCCAAG ACCGCCGCCA CCGGCATGAC CATCTCCGAC
AACGAGAACA TCGTCATCAG GAAGGCGAAG CAGCTTACCC CGGTCGCGGT CACCACGTTT
CCGCTCCTGC GGCAGGACGG CGAGCCCATC GGCACCATCC TCATGCTGCG GGACCTGACG
AACATCCGGG AACTGGAAGA TGCGGTCCGC CACGCCGACC GGCTCTCCAC CCTCGGCACC
CTGGCGGCGG GCCTGGCCCA CGAGATCAAG AACCCTCTGG GGGGGATCAA GGGGGCGGCC
CAGCTTCTGG AAATGGAGCT CCCCCCCGAG AGCGAACTGC GGGACAACGT CCGGGTCGTG
GTCAGGGAGG TGGACCGGGT CAACCGGATC GTGGAGGAGC TCCTGGCACT CTCATCGCCC
CGCAAGCTCC AACTCACCAA GGTGAACCTC CACAAGATCC TCGGCGACAT TGTCACTCTC
AGGAAACGGG CCACGGAAGG GAAGTCCGTC ACGTTCCAGC AGCAGTTCGA CCCGAGCATC
CCGCCGATCC TGGCCGACGA GGGGCTCCTG ACCCAGCTCT TCCTGAACCT GATCAAGAAC
GCCGTGGAGG CGGTGGACGA GCGGGGCACC ATCCGGGTCG CGAGCCGGGT CCTCTCCGAC
TACAGCATGA CCCCGAAGGG GGAGCGCCGC TCCCGCATGG TGGCCGTCGA TGTCCGCGAC
GACGGCCCCG GTATCCCCAG GGAGCAACTG GAGCAGCTCT TCACCCCCTT CTTCACCACC
AAGGCCAAGG GGACCGGACT CGGCCTCGCC ATCTGCCAGA AGATCGTCAC AGAGCACCGG
GGCATGCTCA AGGTGGAATC GGACCCGGGC ACGGGGACGA CGTTCACGGT GATGCTGCCG
TTAATTCAGT AA
 
Protein sequence
MSPESPNEAF LATIIDSVGD GVIVIDLGGR ITLMNPAAEE IIAISRRQAM GHPFAALLGS 
QEILVDMVAK TAATGMTISD NENIVIRKAK QLTPVAVTTF PLLRQDGEPI GTILMLRDLT
NIRELEDAVR HADRLSTLGT LAAGLAHEIK NPLGGIKGAA QLLEMELPPE SELRDNVRVV
VREVDRVNRI VEELLALSSP RKLQLTKVNL HKILGDIVTL RKRATEGKSV TFQQQFDPSI
PPILADEGLL TQLFLNLIKN AVEAVDERGT IRVASRVLSD YSMTPKGERR SRMVAVDVRD
DGPGIPREQL EQLFTPFFTT KAKGTGLGLA ICQKIVTEHR GMLKVESDPG TGTTFTVMLP
LIQ