Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2562 |
Symbol | |
ID | 3738866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 2908697 |
End bp | 2909788 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637779848 |
Product | signal transduction histidine kinase, nitrogen specific, NtrB |
Protein accession | YP_385506 |
Protein GI | 78223759 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00117213 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCCCGG AAAGCCCCAA CGAAGCGTTC CTTGCCACCA TCATCGACAG CGTCGGCGAC GGGGTCATCG TCATCGACCT GGGGGGGCGG ATCACCCTCA TGAACCCTGC GGCCGAGGAG ATCATCGCCA TCTCCCGGCG CCAGGCCATG GGGCACCCCT TCGCGGCCCT CCTCGGCAGT CAGGAGATTC TGGTGGATAT GGTCGCCAAG ACCGCCGCCA CCGGCATGAC CATCTCCGAC AACGAGAACA TCGTCATCAG GAAGGCGAAG CAGCTTACCC CGGTCGCGGT CACCACGTTT CCGCTCCTGC GGCAGGACGG CGAGCCCATC GGCACCATCC TCATGCTGCG GGACCTGACG AACATCCGGG AACTGGAAGA TGCGGTCCGC CACGCCGACC GGCTCTCCAC CCTCGGCACC CTGGCGGCGG GCCTGGCCCA CGAGATCAAG AACCCTCTGG GGGGGATCAA GGGGGCGGCC CAGCTTCTGG AAATGGAGCT CCCCCCCGAG AGCGAACTGC GGGACAACGT CCGGGTCGTG GTCAGGGAGG TGGACCGGGT CAACCGGATC GTGGAGGAGC TCCTGGCACT CTCATCGCCC CGCAAGCTCC AACTCACCAA GGTGAACCTC CACAAGATCC TCGGCGACAT TGTCACTCTC AGGAAACGGG CCACGGAAGG GAAGTCCGTC ACGTTCCAGC AGCAGTTCGA CCCGAGCATC CCGCCGATCC TGGCCGACGA GGGGCTCCTG ACCCAGCTCT TCCTGAACCT GATCAAGAAC GCCGTGGAGG CGGTGGACGA GCGGGGCACC ATCCGGGTCG CGAGCCGGGT CCTCTCCGAC TACAGCATGA CCCCGAAGGG GGAGCGCCGC TCCCGCATGG TGGCCGTCGA TGTCCGCGAC GACGGCCCCG GTATCCCCAG GGAGCAACTG GAGCAGCTCT TCACCCCCTT CTTCACCACC AAGGCCAAGG GGACCGGACT CGGCCTCGCC ATCTGCCAGA AGATCGTCAC AGAGCACCGG GGCATGCTCA AGGTGGAATC GGACCCGGGC ACGGGGACGA CGTTCACGGT GATGCTGCCG TTAATTCAGT AA
|
Protein sequence | MSPESPNEAF LATIIDSVGD GVIVIDLGGR ITLMNPAAEE IIAISRRQAM GHPFAALLGS QEILVDMVAK TAATGMTISD NENIVIRKAK QLTPVAVTTF PLLRQDGEPI GTILMLRDLT NIRELEDAVR HADRLSTLGT LAAGLAHEIK NPLGGIKGAA QLLEMELPPE SELRDNVRVV VREVDRVNRI VEELLALSSP RKLQLTKVNL HKILGDIVTL RKRATEGKSV TFQQQFDPSI PPILADEGLL TQLFLNLIKN AVEAVDERGT IRVASRVLSD YSMTPKGERR SRMVAVDVRD DGPGIPREQL EQLFTPFFTT KAKGTGLGLA ICQKIVTEHR GMLKVESDPG TGTTFTVMLP LIQ
|
| |