Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2561 |
Symbol | |
ID | 3738865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 2907726 |
End bp | 2908700 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637779847 |
Product | dihydrouridine synthase TIM-barrel protein nifR3 |
Protein accession | YP_385505 |
Protein GI | 78223758 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.000534823 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCAACC CCCTGGCCAT CGGCCCCCTG ACCCTGGCAA ACAATCTGAT CCTCGCCCCC ATGGCGGGAA TTACGAACCT CCCCTTCCGG CTTCTGGCCC GGGAGGAGGG GGCGAGCCTC TGCTTTACCG AGATGGTGAG CGTGAACGGC CTCGTGCGGG AGGGGCGCAA GACCTTCGAG CTTCTGCGAA GCGTGCCGGA GGACCGTCCC CTGGGGATCC AGCTCTTCGG CGACGACCCG CAGCTTCTGG CCGAAGGGGC ACGGATGGTG GAGGGGCACG GCGACCTCAT CGACATCAAC ATGGGATGCC CGGTCAAGAA GGTGGTCGGC ACCGGGGCCG GCAGCGCCCT GTTGCGGGAG CCGGCAAAGG TCCGGGCCAT CATCCGTGAG ACCCGCCGCG CCACACGCCT TCCCCTGACC GTCAAGATCC GCAGCGGCTG GGCCTGCGGC GAGGCCAACT TCCTTGATAT CGCCCAGATT GCCGAGGAGG AGGGGTGCGA CGCCATCACC CTCCACCCCC GGAGCCGGTC CCAGATGTTC GAGGGGCACG CCGACTGGCA GCAGATCGCC GAGATGAAGC AGAGCGTGAA AATCCCCGTC ATCGGCAGCG GCGATCTCTT CACCGCCGCC GACGTCACCG CCATGCTGGC CGAAACCGGC TGCGACGGAG TCATGGTGGC CCGGGGCGCC CTGGGTAACC CGTGGATCTT CCGCCAGGCC CTGGCCCTCC TGGACGGCAG GGAACCGGAC GCACCCTCCA CCGGGGAGCG GCTCCGCGCC GCGCTCCGAC ACCTGGAGCT CTTCACGGAG CTCGCCGGCG AGCGGGTGGC CCTGCGGGAG ATGCGCAAGC ACTTCAGCTG GTATTCCCAC GGTCTCTCCG GCGCGGCCCA GTTCCGCAAG GCCGTCAACA TCATCGAGGG AAAGGAAGCC CTTCTCGAAG CGCTGCACCG CTTCTTCGCG CCGGAGGCGC CATGA
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Protein sequence | MLNPLAIGPL TLANNLILAP MAGITNLPFR LLAREEGASL CFTEMVSVNG LVREGRKTFE LLRSVPEDRP LGIQLFGDDP QLLAEGARMV EGHGDLIDIN MGCPVKKVVG TGAGSALLRE PAKVRAIIRE TRRATRLPLT VKIRSGWACG EANFLDIAQI AEEEGCDAIT LHPRSRSQMF EGHADWQQIA EMKQSVKIPV IGSGDLFTAA DVTAMLAETG CDGVMVARGA LGNPWIFRQA LALLDGREPD APSTGERLRA ALRHLELFTE LAGERVALRE MRKHFSWYSH GLSGAAQFRK AVNIIEGKEA LLEALHRFFA PEAP
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