| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2550 |
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| Symbol | |
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| ID | 3738835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2895584 |
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| End bp | 2897224 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637779836 |
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| Product | TrkA-C:YidE/YbjL duplication |
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| Protein accession | YP_385494 |
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| Protein GI | 78223747 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2985] Predicted permease |
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| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000172993 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000000000069423 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAAAA TATTCATCGA CAATCCGCTT CTTCTTCTCT TCGTCGTCGC CGCCATCGGG
TATCCCCTCG GCCGGATCCG GATCAGGGGG TCGAGCCTCG GCGTGGCGGC GGTCCTCTTT
GTCGGCCTTG GCATCGGCGC GCTCCATCCG GAGCTGAAAC TCCCTGAAAT TGTCTATGTC
CTGGGGCTTG CCCTCTTTGT CTATACCATC GGGCTCGCCA GCGGGCCGGC CTTTGTGGCG
TCGCTCAAGG AGGACGGGGT TCGGAACAAC CTCCTCATTC TCGGCGTTCT TGTGCTCGCG
GCGGCCCTCA CCGTAGCTGC CCAGCGGTTT CTTGCCCTTC CGGCCACAAT CACCGCCGGC
CTTTTCGCCG GCAGTCTCAC CAATACCCCG GCCCTTGCCG GCGCCCTTGA AACCATCAAG
CACGTGGCGC CGCAAAATCT CATGGAACAG CTCCTGGCCG AGCCGGTCGT GGGCTACTCC
ATCGCCTATC CCATGGGGGT TATGGGGGTG GTGCTCGCCA TCAGCCTCGT CCAGAAGCTC
TGGCGGATCG ACTACGCGGA AGAGGCGGCA CGGACCAGGA TCGCCGGCGC CGCCACCGAA
AGCCTGAGGT CCAGAACAAT CCGGGTCACT TGGCCCCAGG CCGGACGACA GACCGTTGCG
GCACTCTCTC ATCAGCAAAA GTGGGACGTG GTTTTCGGCA GAATCAAGCG CGGGGATGAA
TGTCTGCTGA CCGGGCCGGA GGTCCGCTTC CGCCCGGGGG ATCTGGTGCT GGCGGTCGGT
ACCGATGTGG AACTGCAGCA TGTGGCGGAG GTTCTCGGCG AGGTGAGCGA AGAGGAGATT
ACCGTCGACC GGAGCGAGTT CGACTACCGG CGGATCTTCG TCTCCAATCC GCGGGTGGCC
GGCCGGCGGC TGGGGAGCCT GAATCTCTTC GAACGGTTCG GCGCCACGGT AACCAGGGTC
CGGAGGGGTG ACGACGATTT CCTCCCCCAC GACGACATGG TGCTGGAGTT GGGGGACCGG
GTCCGGGTGG TCACCCACCG GGATCGGATG GGGGAGGTGA CGGCCCTGTT CGGCGACTCC
TACCGGGCGG TTTCCGAAGT GGACATCCTT ACCTTCAGCC TGGGACTTGC TCTGGGGCTG
TTGCTCGGCA TCGTGCCGTT TCCCCTGCCG GGGGGGGTGA CGCTCAAGCT CGGCTTTGCG
GGCGGCCCCC TCATCGTGGC GCTCGTCCTC GGAACTCTCG GCCGCTCGGG AGGAATGATC
TGGAGCCTCC CCTACAGCGC CAACATGACA CTGCGCCAGA TCGGTCTCGT CCTCTTCCTG
GCCGGCATCG GCACCCGGGC CGGCTACGGC TTCGTCTCCA CCCTTGCCAA GGGTGGCGGG
TTCGCCATCT TCGCCGCAGG AGCGGTGGTC ACCTGCTTTG CAGCCCTTAC CACCCTATGG
GTCGGTCACC GGATCCTCAA GATTCCCATG GGGATCCTCA TCGGCATGGT GGCCGGCCTC
CAGACCCAAC CCGCGGTTCT CGGTTATGCC CTGGAGCAGA CCGGCAACGA TCTCCCCAAC
ATCGGCTACG CCTCGGTCTA CCCGGTCGCA ACCATCGGGA AGATACTCAT TGTCCAGGTG
CTTTTGTCCT TACTGATGTG A
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| Protein sequence | MIKIFIDNPL LLLFVVAAIG YPLGRIRIRG SSLGVAAVLF VGLGIGALHP ELKLPEIVYV
LGLALFVYTI GLASGPAFVA SLKEDGVRNN LLILGVLVLA AALTVAAQRF LALPATITAG
LFAGSLTNTP ALAGALETIK HVAPQNLMEQ LLAEPVVGYS IAYPMGVMGV VLAISLVQKL
WRIDYAEEAA RTRIAGAATE SLRSRTIRVT WPQAGRQTVA ALSHQQKWDV VFGRIKRGDE
CLLTGPEVRF RPGDLVLAVG TDVELQHVAE VLGEVSEEEI TVDRSEFDYR RIFVSNPRVA
GRRLGSLNLF ERFGATVTRV RRGDDDFLPH DDMVLELGDR VRVVTHRDRM GEVTALFGDS
YRAVSEVDIL TFSLGLALGL LLGIVPFPLP GGVTLKLGFA GGPLIVALVL GTLGRSGGMI
WSLPYSANMT LRQIGLVLFL AGIGTRAGYG FVSTLAKGGG FAIFAAGAVV TCFAALTTLW
VGHRILKIPM GILIGMVAGL QTQPAVLGYA LEQTGNDLPN IGYASVYPVA TIGKILIVQV
LLSLLM
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