Gene Gmet_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2538 
Symbol 
ID3738823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2879045 
End bp2879839 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content58% 
IMG OID637779824 
Producttransposase/IS protein 
Protein accessionYP_385482 
Protein GI78223735 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000000073065 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGACA TCCAGCACCA GCGTATGGTC ACCCTCTGCG ACGACTTGAA GTTTCTGGCG 
GTGACCGATG TGTACGCCGA CCTTGCCGAT GCTGCGGCAA AGCAGGAGTC GTCATACATC
GACTATCTCG AGCAGGTACT CAAGGCCGAG AACGACGTCC GGCAGGGGCG CTCGCGCCAC
ACCATGGCAA AGCTCGCGGG CTTTCCCGCG ATCAAGACCC TTGAGGATTA TGACTTCGAT
TTTGCCACCG GCGCCCCGAA GCAGCGAATC CTGGACCTAT CGGCAATGGC GTTTCTGGAG
CGTCGGGAGA ATGTAATCCT GCTCGGTCCC AGCGGTACCG GCAAGACTCA CCTCGCCATT
GCCCTCGGCT ACCGGGCAAC CCAGTGCGGC GTGAAGGTGC GCTTCATTTC CGCTGCGGAC
CTGATGCTGC AACTCGAAAG CGCCCAGCGC CAGGGGCGGT ACAAGGAAGT AATGCGGCGC
AGTGTCCTGG GGCCGAGACT ACTCATCATC GACGAGATTG GATACCTTCC GTTCAGCGAA
ACACAGGCAA ACCTGTTCTT TCAGGTGATC GCCAAAAGGT ACGAAACAGG TTCCGTCATC
CTCACCTCGA ACCTGAGCTT TGGGGAATGG GAACAGGCTT TCGGCGGCAA CACGGCACTC
ACATCAGCAA TGCTCGACCG GTTGCTGCAC CACGCCCATG TCATTCAGAT CAGGGGTGAC
AGCTACCGAT TGAAAGAGAA GCGCCGAGCT GGCATTCTCG GGCAGCAACT GCCGACACCC
CAGATGGATG ATTAA
 
Protein sequence
MSDIQHQRMV TLCDDLKFLA VTDVYADLAD AAAKQESSYI DYLEQVLKAE NDVRQGRSRH 
TMAKLAGFPA IKTLEDYDFD FATGAPKQRI LDLSAMAFLE RRENVILLGP SGTGKTHLAI
ALGYRATQCG VKVRFISAAD LMLQLESAQR QGRYKEVMRR SVLGPRLLII DEIGYLPFSE
TQANLFFQVI AKRYETGSVI LTSNLSFGEW EQAFGGNTAL TSAMLDRLLH HAHVIQIRGD
SYRLKEKRRA GILGQQLPTP QMDD