Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2538 |
Symbol | |
ID | 3738823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2879045 |
End bp | 2879839 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637779824 |
Product | transposase/IS protein |
Protein accession | YP_385482 |
Protein GI | 78223735 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000000073065 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGACA TCCAGCACCA GCGTATGGTC ACCCTCTGCG ACGACTTGAA GTTTCTGGCG GTGACCGATG TGTACGCCGA CCTTGCCGAT GCTGCGGCAA AGCAGGAGTC GTCATACATC GACTATCTCG AGCAGGTACT CAAGGCCGAG AACGACGTCC GGCAGGGGCG CTCGCGCCAC ACCATGGCAA AGCTCGCGGG CTTTCCCGCG ATCAAGACCC TTGAGGATTA TGACTTCGAT TTTGCCACCG GCGCCCCGAA GCAGCGAATC CTGGACCTAT CGGCAATGGC GTTTCTGGAG CGTCGGGAGA ATGTAATCCT GCTCGGTCCC AGCGGTACCG GCAAGACTCA CCTCGCCATT GCCCTCGGCT ACCGGGCAAC CCAGTGCGGC GTGAAGGTGC GCTTCATTTC CGCTGCGGAC CTGATGCTGC AACTCGAAAG CGCCCAGCGC CAGGGGCGGT ACAAGGAAGT AATGCGGCGC AGTGTCCTGG GGCCGAGACT ACTCATCATC GACGAGATTG GATACCTTCC GTTCAGCGAA ACACAGGCAA ACCTGTTCTT TCAGGTGATC GCCAAAAGGT ACGAAACAGG TTCCGTCATC CTCACCTCGA ACCTGAGCTT TGGGGAATGG GAACAGGCTT TCGGCGGCAA CACGGCACTC ACATCAGCAA TGCTCGACCG GTTGCTGCAC CACGCCCATG TCATTCAGAT CAGGGGTGAC AGCTACCGAT TGAAAGAGAA GCGCCGAGCT GGCATTCTCG GGCAGCAACT GCCGACACCC CAGATGGATG ATTAA
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Protein sequence | MSDIQHQRMV TLCDDLKFLA VTDVYADLAD AAAKQESSYI DYLEQVLKAE NDVRQGRSRH TMAKLAGFPA IKTLEDYDFD FATGAPKQRI LDLSAMAFLE RRENVILLGP SGTGKTHLAI ALGYRATQCG VKVRFISAAD LMLQLESAQR QGRYKEVMRR SVLGPRLLII DEIGYLPFSE TQANLFFQVI AKRYETGSVI LTSNLSFGEW EQAFGGNTAL TSAMLDRLLH HAHVIQIRGD SYRLKEKRRA GILGQQLPTP QMDD
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