Gene Gmet_2522 details

Gene Information

• Locus tag: Gmet_2522
• Symbol: mscL
• ID: 3738573
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter metallireducens GS-15
• Kingdom: Bacteria
• Replicon accession: NC_007517
• Strand: +
• Start bp: 2866289
• End bp: 2866726
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637779810
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_385468
• Protein GI: 78223721
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00000000515588
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 42
• Fosmid unclonability p-value: 0.121482
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGAATGA TGGAAGAGTT CAAGGAGTTC GCGGTCAAGG GGAATGTGGT TGACCTGGCG 
GTCGGTGTGA TTATTGGTGG TGCGTTCGGC AAGATCGTCA CGTCATTCGT CAGCGACATC 
GTCATGCCTC CCCTCGGGCT TATCATGGGG AAGGTGAACT TCACCGACCT GTTCATAAAC 
CTTTCCGGCA AACCCTTCGA CAGCCTCAAG GCCGCCAAGG ATGCCGGAGC CCCGGTCATC 
AGCTACGGCG TCTTCATCAA CACACTGATC GACTTCATTA TCATCGCCTT CGTCATCTTC 
ATGGTCATCA AGCAGATCAA CCGTTTCAAG AAAGAGCCGG CACCCGCTCC ACCCAACACC 
AAGGAGTGCC CCCACTGCCT GTCGGCCGTT CCCATCAAGG CCACCAAATG CGCTTTCTGC 
ACTTCTGACA TCAAGTAA 

 

Protein sequence

MGMMEEFKEF AVKGNVVDLA VGVIIGGAFG KIVTSFVSDI VMPPLGLIMG KVNFTDLFIN 
LSGKPFDSLK AAKDAGAPVI SYGVFINTLI DFIIIAFVIF MVIKQINRFK KEPAPAPPNT 
KECPHCLSAV PIKATKCAFC TSDIK