| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2506 |
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| Symbol | |
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| ID | 3738992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2845490 |
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| End bp | 2846440 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637779795 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_385453 |
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| Protein GI | 78223706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGAC TATCGTTCAT GGAGTTGGAG ACCGTACATA CCGCACTTCG CCAGGAGCTA
TGGCTCCCCG TGGCGCCGGG AGCATTGGAA GAGGGGAAGG CCCAACTCTG GGGGCTGGTC
CTTGAGTCCC GGGCTGTCCC GTGCCGTAGT GTTCGGAGCG ATAACGGATG GCACGTGGTG
GTGCCGGCGT CATTCTACGA CCGGGCCGTG GAGGAGGTGC GCCTCTTCGA AGAGGAAAAC
CGCAACTGGC CTCCGCCGGC ACCACCGGTC AGGACCATGA ACGGGAATGT CCTGGCGACT
CTGTCAGTCC TCTTTCTCCT GGCCACCTTT CACAACATCA CCCGGCTTGA TGTCACCCTC
CCCGGTCATC CCCCGCTCGA CTGGCTTGCC CTCGGCAGCG CCGATGCCGC AAAGATCATG
GATGGCCAGT GGTGGCGCGC AGTAACCGCC CTCACCCTCC ATGCGAATCT GCCGCACCTT
GTGAGCAACC TTGCGATCGG CGGGGTGCTG GTCATCCTCC TCTGTCGCGA AATCGGTTCG
GGCCTCGCCT GGAGCCTCAT CCTTGGTTCG GGAATCCTCG GGAACCTCGT CAACGCGTTA
CTTCACTCCT CCGGCCACAT TTCGGTCGGT GCTTCCACCG CGGTATTCGG TGCGGTCGGC
ATCCTCGCCT CAAGCAGCGT GGTGCGCCAT CGCCATCACC TGCAGAGACG GTGGCCGCTC
CCGGTTGCCG CCGGCCTGGC CCTCCTGGCG GTCCTTGGAA CGGAAGGCGA ACACACCGAC
CTTGGCGCGC ACCTGTTTGG ATTTTTGTGG GGGATAGCGC TTGGCGCCGT GGCGGAATAT
CTGATCGGCA GGTTCGGGCA GCCCGGTCCG GTCCTCAATG CGGTGCTGGC AATTGCCAGT
GCCGTGGGGG TGGTGTTCTC CTGGTGGGTG GCGCTTGCTG TTGCCCCGTA G
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| Protein sequence | MIRLSFMELE TVHTALRQEL WLPVAPGALE EGKAQLWGLV LESRAVPCRS VRSDNGWHVV
VPASFYDRAV EEVRLFEEEN RNWPPPAPPV RTMNGNVLAT LSVLFLLATF HNITRLDVTL
PGHPPLDWLA LGSADAAKIM DGQWWRAVTA LTLHANLPHL VSNLAIGGVL VILLCREIGS
GLAWSLILGS GILGNLVNAL LHSSGHISVG ASTAVFGAVG ILASSSVVRH RHHLQRRWPL
PVAAGLALLA VLGTEGEHTD LGAHLFGFLW GIALGAVAEY LIGRFGQPGP VLNAVLAIAS
AVGVVFSWWV ALAVAP
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