Gene Gmet_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2479 
Symbol 
ID3740155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2820909 
End bp2822813 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content66% 
IMG OID637779771 
ProductABC transporter-related protein 
Protein accessionYP_385429 
Protein GI78223682 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0549886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCA TCGATGTTGT CGGGCTCGCC AAGAGTTTCG GCTCCCGCAC GGTTCTCGAC 
GGTGTCACCT TTGCCGTGGG CGAGGAGGAG AAGGTCGGCC TCATCGGCGT CAACGGCTGC
GGCAAGTCGA CCCTCATGCA GATCCTTGCG GGGCTTGAGG AGCGGGACGG CGGCACCATC
ATGACCCGTC GCGGCGCGTC CATCGGCTAC CTCTCCCAGG AGCCGCTCCT TGACGACGGG
CTCACCATCG GCGAGGAGAT TGAGCAAGGT CTCGTGGAGA TCCGGCGGGT CATGACCGAG
TACGAGGGGG TGACGGCACA GCTTGCCGAG CCGTCGCCGG ACCACGACCG GCTCCTGGAG
CGCCAGGGAG AGCTGACCTC CTGGATAGAA CACCATGGCG GCTGGAACAC CGACCACCGG
GTGGCGGAGA TCATGACCCA CCTGGGAATC CCCGACCGGA ACCGGCGTCT CGGCGAGCTC
TCCGGCGGGA CGAAGCGGCG GGTGGCCCTG GGGCGCCTCC TCCTCCAGGC CCCGGACCTC
CTCCTTCTGG ACGAGCCCAC CAACCACCTG GACGCCGACA CGGTCCAGTG GCTTCAGGAG
CACCTTATGG CCTATTCCGG CGCGGTGCTC CTCATAACCC ACGACCGCTA CTTCCTCGAC
CAGGTGGTGG GGAGGATGCT GGACCTGGAG CGGGGCCTGA TTACTGCATA CAGCGGCGGT
TACTCCAGCT ACCTCATCCA GCGGGAGGAG CGGCTGGCCC GGGAGGCCCG GGGGCACGAC
CGGCTCCTGA ATCTCCTCCG GAACGAGACC GCCTGGATGC GGCGGGGCCC CAAGGCCCGC
ACCACCAAGC AGAAGGCCCG CATCGACCGG TTCCACGACC TTGAGGCCCG TGCACAGGTG
GAGACGACCC GGGAGACCAC CATCGCCTTC ACCCCCGGTG ATGGTCTGGG TGGCACCATC
ATGGAGCTCC AGGGGGTGCG GAAGTCCCTG GGGGGACAGC TCCTGGTGGA CGACCTCACC
TTCCTCATGA AGCGCGGCGA CCGGGTCGGG ATCATTGGCC CCAACGGCTG CGGCAAGACC
ACCCTCATGC GGATGATCAT GGGGGAAGAG CCGCCCGATG GCGGGACGGT GGTAATCGGT
GCCAAGACCC GCATCGCCTA CTTTGACCAG AACCGGGAAA TCCTCGATCC GTCACTGACC
CTCTATGATT TCCTCGGCGA GGGGGATTAC GTGACGGTGG GGGGGGAGCG GCGCCACAAG
ATTGGCTACC TGGAGGAGTT CCTCTTTCCG CCGTCCGACC GGATGCGGCG GATCGCCACC
CTCTCCGGCG GCGAGAAGAG CCGCCTCATC CTGGCGCGCC TCATGCTGGC GGACGCCAAC
CTCCTCGTCC TGGACGAGCC CACCAACGAC CTCGACATCC CGACGCTGCA GCTTCTGGAC
GATGCCCTGA CCCGCTTTCC CGGCTGTATC CTCATGGTGA CCCACGATCG CTTTTTCCTC
GATAAGGTGG CAACGGGCAT CCTCTCCTTC GAGGGAGAGG GGAGGACCGT CTTCTACGAA
GGGAACTACA CCCTCTACCG GGAGCTGAGA GCGCAAAATC TGAAAGAAGA GAATAAGGGC
GGGAGTGGCA GGCCCGTTGC GGCACCTCCT GCGGTACGCG AACGGCCCCG CAAGAAGGGG
CTCACCTTTG CCGAAAGGCA GGAGCTCGAG CGGGTCGAGG CGGAGATCGC CCACCTGGAG
CTCCGGACGG CGGAGGTGGA AGCCGCCCTG GCGGATCCTG CCGCCTATGC TGGGGCGCCG
GGGGGGATAG CGGCCCTTTC CACGGAATTC GCCCATATGG GAGAGAAACT GGAGGAACTT
CTCCTTCGCT GGGAAGAGCT CGAAACCAAG CGGTCGGAGG CGTAG
 
Protein sequence
MNVIDVVGLA KSFGSRTVLD GVTFAVGEEE KVGLIGVNGC GKSTLMQILA GLEERDGGTI 
MTRRGASIGY LSQEPLLDDG LTIGEEIEQG LVEIRRVMTE YEGVTAQLAE PSPDHDRLLE
RQGELTSWIE HHGGWNTDHR VAEIMTHLGI PDRNRRLGEL SGGTKRRVAL GRLLLQAPDL
LLLDEPTNHL DADTVQWLQE HLMAYSGAVL LITHDRYFLD QVVGRMLDLE RGLITAYSGG
YSSYLIQREE RLAREARGHD RLLNLLRNET AWMRRGPKAR TTKQKARIDR FHDLEARAQV
ETTRETTIAF TPGDGLGGTI MELQGVRKSL GGQLLVDDLT FLMKRGDRVG IIGPNGCGKT
TLMRMIMGEE PPDGGTVVIG AKTRIAYFDQ NREILDPSLT LYDFLGEGDY VTVGGERRHK
IGYLEEFLFP PSDRMRRIAT LSGGEKSRLI LARLMLADAN LLVLDEPTND LDIPTLQLLD
DALTRFPGCI LMVTHDRFFL DKVATGILSF EGEGRTVFYE GNYTLYRELR AQNLKEENKG
GSGRPVAAPP AVRERPRKKG LTFAERQELE RVEAEIAHLE LRTAEVEAAL ADPAAYAGAP
GGIAALSTEF AHMGEKLEEL LLRWEELETK RSEA