| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2477 |
|---|
| Symbol | trpA |
|---|
| ID | 3740153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2817743 |
|---|
| End bp | 2818552 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637779769 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_385427 |
|---|
| Protein GI | 78223680 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.854745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 85 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGAA TTACCGGTAC ATTTGCCGAG TTGAAACGAA CCGGAAAAAA GGCCTTGGTG
ACCTTTATCA CGGCCGGTGA TCCGGACCTT GCAACGACAG AAGAGCTGAT ACCGCTCCTG
GCGGAGAACG GCGCCGACAT CATCGAGCTG GGGGTACCCT TTTCCGACCC CATGGCCGAT
GGCCCCACGA TCCAACTCTC CTCCGAGCGT GCCCTTGCCG CCGGCACAAC CCTGTCGAGG
ATTTTAGCTA CAGTAAAATC CGTCCGGGGT CGCACCCAGG TCCCCATCGT CCTGATGGGA
TACTTCAACC CGATCTTCAG CTACGGCCTC GAACGGTTTG CCGCCGATGC GGCCGCGGCA
GGGGTCGACG GCGTCCTGCT GGTGGATCTT CCCCCCGAAG AGGCGGGGGA GTTCAAGGCG
TGCGCCGACC GGCACGGGAT CGACGTCATT TTCCTCCTCA CTCCCACGTC CGACGAGACG
CGGATCCGCA CGGTGACCAA CCGTGCCCGT GGCTTCATCT ACTATGTCTC CGTAACCGGC
GTGACCGGTG TCCGCAGCGG CATAGAGGCA TCGGTGGCCG GCAACGTGAA CATCATCAAG
GAGTGCTCTA AGGTGCCGGT GGCAGTAGGA TTCGGTATCG CCACCCCCGA ACAGGCGGGG
GAGGTGGCTG CCACGGCCGA CGGCGTGGTG GTCGGCAGCG CCATTGTGAA GCTTTTCGAG
AAGCACCGGG GTGAGGAACT CAAGGGAGCA CTGGCAACCT TTGTCTCATC GCTGAAGCAG
GCAGTGGACC GGGGAAGATA CGACAATTGA
|
|---|
| Protein sequence | MSRITGTFAE LKRTGKKALV TFITAGDPDL ATTEELIPLL AENGADIIEL GVPFSDPMAD
GPTIQLSSER ALAAGTTLSR ILATVKSVRG RTQVPIVLMG YFNPIFSYGL ERFAADAAAA
GVDGVLLVDL PPEEAGEFKA CADRHGIDVI FLLTPTSDET RIRTVTNRAR GFIYYVSVTG
VTGVRSGIEA SVAGNVNIIK ECSKVPVAVG FGIATPEQAG EVAATADGVV VGSAIVKLFE
KHRGEELKGA LATFVSSLKQ AVDRGRYDN
|
|---|
| |