| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2464 |
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| Symbol | |
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| ID | 3738767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 2788435 |
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| End bp | 2790255 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637779756 |
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| Product | TatD-related deoxyribonuclease:radical SAM family protein |
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| Protein accession | YP_385414 |
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| Protein GI | 78223667 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCAGT ACTCCTGGCG CGAAATACTG GAGGCAGACC GCTGCCGCAG CCCGGAAAGC
TCCGTCAATG CCCGTTTTTT AGCAGTGGGA GGCGTCGAAC ATCCCGCAAA GAGAACTGCC
GCCGCCAGAA AGGAAACCGT ACCTCCCATC CCGACGCCGA CCCGGCACAT TAATGAGACT
CTCTGTGCTG CATTTCCAGA CAAGACCTCG TCCCCCTTCA TCCGCATACC ATACAACAAT
CCGTATACCA CGGAACATTG CACGGTAACA AGGGATGCTT ACGACCACTA CAGGAGTCTG
GCAGTGGATG CCGACACTGA TGGCAACGCC GTGATTCTGT GCCCTTGCCA GGGGACGGAC
ATTCATGATA GTTCTGTTTC AAGCGGCATC ACCATGCCGC CTTTTACGTT GCACCGCGAA
AAAGGAACAA TCATGAACGA GACCGGTTTC CTCATTGACA CCCATGCCCA CATCGACGGT
CACGACTTTG TCGCCGACTT CGACGAGGTG CTTGGCCGCG CCGCCGAGGC GGGGCTCTCC
CATATCATCA CCGTCGGCGC AGACCTTGAG TCGAGCCAGG CCGCCTGCGA ACTGGCCCGC
AAGCACGACC ACATCTACTG CGCCGTGGGG GTCCACCCCC ACGACGCCTC GCGGGTGACC
GAACGCTGCT ACCAAGTCAT TCGAGAGTTG GCCCAGGGGA ACCCGAAGGT GGTAGCCATC
GGCGAGATCG GCCTCGACTT CTACCGGGAT CGCTCCCCCC GCGACGAGCA GGAACGGGTT
TTCCGCCACT TCATCCGCCT CGCCCGGGAA CTGGCGCTGC CGATCATCGT CCACGACCGG
GACGCCCACG ACCGGGTCAT GGCGATCCTG CGGGAGGAAA AGGCCGCCGA AGTGGGGGGG
GTGCTCCACT GCTTTTCCGG GGACCTGGCC ATGGCGCGCG AATGCGTGGA AATGGGATTT
TACCTCTCCA TCCCCGGCAC CGTCACCTAC CCCTCCAACG AACAGCTCCG CGAGGTGGTG
CGCGGCATCA GGACCGAGCA CCTGCTTATC GAGACCGACT GCCCCTACCT CTCGCCGGTT
CCCCACCGGG GAAAACGGAA CGAACCGGCA TATGTCCGGC TCACCGCCAC GAAGGTGGCG
GAACTGAAGG GGCTCACCCT GGAGGACGTG GGGCGGATCA CCTCCCTCAA CGCCCGGCGG
CTCTTCGGCA TCGGCGGCAA GGACCAGGCG GCCCGGATCG CCTACCGGAT CAGGAACTCC
CTCTACCTCA ACATCACCAA CCGCTGTTCC AACCGCTGCT CCTTCTGCGC CAAGTTCGAC
GACTTCACCG TGAAAGGGCA TTACCTGCAG CTTGACCACG AGCCGAACTT CGACGAGGTG
ATGGCTGCCA TCGGCGATCC CGGCCCGGTG GACGAAGTGG TATTCTGCGG CTACGGTGAG
CCGATGCTCC GCATCGACCT CATCCGGGAA GTGGCGGCCG AGCTCAAGAA GCGGGGTCTC
CGCATCCGGA TCAATACCGA TGGCCAGGCG AACCTGGTCC ATGGCCGCAA CGTCCTGCCG
GAACTGGAGG GACTTATCGA CTGCATCTCT GTCAGCCTCA ACGCTGCCGA CGCCGAAACC
TACGCCCGCC TCTGCAACAC CCCCTTCGGC ACGGCGGGTT TCGACGGCAT CTGCCGGTTC
CTCACGGAAG CGACGAAGCA TATCCCGAAG GTAGTGGCCA CGGCGGTCAC CGTGCCGGGG
GTTGACATCG CAGCCGTGCG GAGCCTTGCC GAGACTCTGG GGGTGGAATT CCGGGAACGG
GAGTACGCCG AGGTGGGATA G
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| Protein sequence | MFQYSWREIL EADRCRSPES SVNARFLAVG GVEHPAKRTA AARKETVPPI PTPTRHINET
LCAAFPDKTS SPFIRIPYNN PYTTEHCTVT RDAYDHYRSL AVDADTDGNA VILCPCQGTD
IHDSSVSSGI TMPPFTLHRE KGTIMNETGF LIDTHAHIDG HDFVADFDEV LGRAAEAGLS
HIITVGADLE SSQAACELAR KHDHIYCAVG VHPHDASRVT ERCYQVIREL AQGNPKVVAI
GEIGLDFYRD RSPRDEQERV FRHFIRLARE LALPIIVHDR DAHDRVMAIL REEKAAEVGG
VLHCFSGDLA MARECVEMGF YLSIPGTVTY PSNEQLREVV RGIRTEHLLI ETDCPYLSPV
PHRGKRNEPA YVRLTATKVA ELKGLTLEDV GRITSLNARR LFGIGGKDQA ARIAYRIRNS
LYLNITNRCS NRCSFCAKFD DFTVKGHYLQ LDHEPNFDEV MAAIGDPGPV DEVVFCGYGE
PMLRIDLIRE VAAELKKRGL RIRINTDGQA NLVHGRNVLP ELEGLIDCIS VSLNAADAET
YARLCNTPFG TAGFDGICRF LTEATKHIPK VVATAVTVPG VDIAAVRSLA ETLGVEFRER
EYAEVG
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