| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2463 |
|---|
| Symbol | |
|---|
| ID | 3738766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2787216 |
|---|
| End bp | 2788097 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637779755 |
|---|
| Product | peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG |
|---|
| Protein accession | YP_385413 |
|---|
| Protein GI | 78223666 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCCG TGGAGAGGGG GGAACCGGCC GAAGCGACCG AAACCGCCAG ACCACGGTCT
TCTGTGATCA TCGGCAAGAG ATTCTCCTAC ACTGTTGGCA AGGGTGAAAG CCTGCGCTAT
ATCGGCGCTA AATTCGGGGT CAGCTGGCGG CGGCTGGCGC AGCTCAACCG GATCGACCCC
CAGAAACCCC TCAGGGCCGG ACAGGTGCTG CGTGTCGACA CCCGCCGGAT TGTCCCCCGC
CAGATCGACG ACGGCATTGT CATAAACATC CCTGATCGCA CTCTCTACTA TTTCCGTAAC
GGAGAGGTTG ACCGGGTGCT TTCTGTCGCC GTGGGAAAAC CGAAACCGGT AAATGATCCC
GAAAAGCGCG ACTGGCATAC GCCGACCGGC AATTTTCGGA TCATCGGAAA GGTGAAGGAT
CCCACCTGGC GTGTCCCCCC CTCCATCCGG AAGGAGATGA AGGAGCGGGG GAAGGAGGTG
AAAACCATTG TCCCGCCGGG GAAGAAAAAC CCTCTCGGGA AATACGCCCT GAAAACGTCG
ATACCAGGAA TTCTTATCCA CAGCACTAAC GCGCCCGAAT CGGTCTACAG TTTCAGCAGC
CATGGCTGCA TCAGGGTTTT TCCCGAATTC ATGGAGGATT TCTTCAATTC CGTGACAGAG
GAGACCACCG GAGAGATTAT TTACGAGCCG GTAAAGATGA CGGTTGCCGA GGGACAGGTG
TTCCTTGAAG TGCACCGGGA CATTTACAAC CGCTACGAGA ATCTCGATGA ACAGGTGAAG
AGCATCGCGC AGGAGCAGCA CGTCGAGGAG AGAATAGACT GGAACAAGGT CCAACAGGTT
CTGAAGAGGA TGAACGGGGT ACCCGAAAGG GTTTCGTTCT GA
|
|---|
| Protein sequence | MRSVERGEPA EATETARPRS SVIIGKRFSY TVGKGESLRY IGAKFGVSWR RLAQLNRIDP
QKPLRAGQVL RVDTRRIVPR QIDDGIVINI PDRTLYYFRN GEVDRVLSVA VGKPKPVNDP
EKRDWHTPTG NFRIIGKVKD PTWRVPPSIR KEMKERGKEV KTIVPPGKKN PLGKYALKTS
IPGILIHSTN APESVYSFSS HGCIRVFPEF MEDFFNSVTE ETTGEIIYEP VKMTVAEGQV
FLEVHRDIYN RYENLDEQVK SIAQEQHVEE RIDWNKVQQV LKRMNGVPER VSF
|
|---|
| |