| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2427 |
|---|
| Symbol | |
|---|
| ID | 3738442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2747417 |
|---|
| End bp | 2749525 |
|---|
| Gene Length | 2109 bp |
|---|
| Protein Length | 702 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637779719 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_385377 |
|---|
| Protein GI | 78223630 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.84182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCC ACAGGCAGGC ATACAAGGAA GAGGCCTACG AGCTCCTGGC GGAGCTGGAG
ACATCGCTCC TGGAGCTGGA GGAAACTCCC GAGGACATGG ACCTCATCAG CCGGGTCTTT
CGTGCCATGC ACACCATCAA GGGGTCCGGG GCCATGTTCG GCTTCGACGA CATTGCCACC
TTCACCCACG AGGTGGAAAC CGTCTTCGAC ATGGTCCGCA ACGGCCGGAT GACGGTCACG
AGGGACCTGG TCAACCTCAC CCTCAAGGCT CGGGACCTCA TTAAGGGGAT GCTGGACGCC
TCGGACGGCG GGGCAGAACC GGTGGAAGGG CGCCAGGCAG AGGAGGTCAT CGCCGGGCTC
CGGCGGCTTG TGCCGGCGGA GCCGGATGGC GCATCCGCCA AAGAAACACC CGTGGGAGGA
GGCGCCCAGG AATCGAAGAG GGGTGAAACA GCGGTCACCT ACCGCATCCG CTTTGTTCCT
TCCCCTGAGG TGACCGTCAA CGGTACCAAC CCGCTGCTCC TTCTGGCGGA ACTCCGCCAG
TTGGGCCACT GCCGAACCGT TGCCCAGATG GCAAAAGTGC CCCGGTTGGA GGAGATTGAT
CCTGAACACT GCCACGTCTT CTGGGACGTG ATTTTGACTA CGAACCGGGG GATTGACGCC
ATTCGGGACG TCTTCATTTT TATCGAGGAC GACTGCGAGC TGAAAATCGA TGTCATCGAC
GACGGCGGTA TCCTCGACGT TGACGCCGAT TACAAGAAGC TCGGCTTTAT TCTCGCGGAA
CGGGGTGATC TGACCCGGCA GGACATGGAG GCGATTCTCG CCAAACAGAA GCGCTTCGGC
GAACTCCTCG TCGAGCAGGG AATCGTTTCC CCCGAGAAGG TTGAGTCGGC CCTCATCGAG
CAGCAGCACG TGAAGGAGGT CCGCAAGGAG CGCCAGGTCC AGGAGAGCGC GTCGAGCATC
CGGGTACCGG CGGAAAAGCT CGACCTGCTG GTGAACCTGG TGGGAGAACT CGTCACCGTC
CAGGCCCGTC TTTCCCAGAC CGCCGCCGGC CGGGCCGATG CCCTGCTGGT TACCATTGCC
GAGGAGGTGG AGCGGCTCAC CAACGAGTTG CGCGACACGG CCCTCAACAT CCGGATGCTC
CCCATCGGCA CCACCTTCAG CAAGTTCAAG CGACTGGTGC GGGATCTGTC GGTGGAGCTG
GGCAAGGATA TCGAGATGAC CACCGACGGC GCCGAGACCG AGCTGGACAA GACGGTCATC
GAGAAGCTGA ACGATCCCCT GGTCCATCTC ATCCGCAACT CCATCGACCA CGGCATCGAG
CGCCCCGAGG AGCGGGCCGC CGCCGGCAAG CCTCCCCAGG GGACCGTGCA CCTGGCCGCA
GTACACTCGG GGGACAGCGT CCTCATCACC ATCACCGACG ACGGCAAGGG ACTCGACCGG
GAGGCGATCC GGGCCAAGGG GGTCGAGCGG GGACTCATCC CGGCCACGGC CGAACTCTCC
GACAAGGAGA TCTTCAGCCT CATCTTCGCC CCCGGCTTCT CCACCGCCAC GACCGTCACG
AGCGTCTCGG GGCGCGGGGT CGGCATGGAC GTGGTGAAGC GGGCCATCGA CGCCCTGCGG
GGAACCATCG ACATCCGGAG CGAGCGGGGG ACGGGGACCG TCATCACCAT CAAGCTGCCG
CTAACCCTTG CCATCATCGA GAGCCTCCTC GTGAAGATCG GCTCCGACTG CTTCGTGCTC
CCCCTCTCCG TCGTGGAGGA GTGCGTGGAA CTGACCCGGG AAGATGTGCG CAACGCCCAC
GGCCGCAACC TGGCCACGGT CCGGGACCAG ATTGTCCCCT ACATCCCCTT GCGGGAGCGG
TTCCTCATCC GGGGTGAGCA GCCGGAGATC GAGCAGATCG TCATCACCCG GGTGGGGGGA
ACGAGGGTCG GCTTTGTGGT GGACCACGTC ATCGGCGAGC ATCAGACGGT GATCAAGTCG
TTGGGGAAGA TGTACAGGGA CGTCCAAGGT CTCTCGGGTG CCACCATTCT GGGTGACGGC
TCAGTGGCCC TCATCCTCGA TATTCCCCAA CTGGTGCGCG ATGTGGAACT GGAGCAGATG
GCCCGTTGA
|
|---|
| Protein sequence | MDAHRQAYKE EAYELLAELE TSLLELEETP EDMDLISRVF RAMHTIKGSG AMFGFDDIAT
FTHEVETVFD MVRNGRMTVT RDLVNLTLKA RDLIKGMLDA SDGGAEPVEG RQAEEVIAGL
RRLVPAEPDG ASAKETPVGG GAQESKRGET AVTYRIRFVP SPEVTVNGTN PLLLLAELRQ
LGHCRTVAQM AKVPRLEEID PEHCHVFWDV ILTTNRGIDA IRDVFIFIED DCELKIDVID
DGGILDVDAD YKKLGFILAE RGDLTRQDME AILAKQKRFG ELLVEQGIVS PEKVESALIE
QQHVKEVRKE RQVQESASSI RVPAEKLDLL VNLVGELVTV QARLSQTAAG RADALLVTIA
EEVERLTNEL RDTALNIRML PIGTTFSKFK RLVRDLSVEL GKDIEMTTDG AETELDKTVI
EKLNDPLVHL IRNSIDHGIE RPEERAAAGK PPQGTVHLAA VHSGDSVLIT ITDDGKGLDR
EAIRAKGVER GLIPATAELS DKEIFSLIFA PGFSTATTVT SVSGRGVGMD VVKRAIDALR
GTIDIRSERG TGTVITIKLP LTLAIIESLL VKIGSDCFVL PLSVVEECVE LTREDVRNAH
GRNLATVRDQ IVPYIPLRER FLIRGEQPEI EQIVITRVGG TRVGFVVDHV IGEHQTVIKS
LGKMYRDVQG LSGATILGDG SVALILDIPQ LVRDVELEQM AR
|
|---|
| |