Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2425 |
Symbol | |
ID | 3738440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2743282 |
End bp | 2744343 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637779717 |
Product | diguanylate cyclase |
Protein accession | YP_385375 |
Protein GI | 78223628 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAAT CGCACATTAT GGCGGGAAAC TGCACGGTAA AACCGGCACG GATGACACGC GCCCCCTATG CACGGCACGA ACTGAAATCG ACAAACTCCG GTTGTGACGA ATCTCCTGCC GCCCTGGAGC GGCGCGTTGC CGAACTGCTT CTCGTGGCGG ATTTTGGCGC TGTTGTCGGT TCCATCCTCG ACCCCCGGCA GGTATGCGAG GTAGCATCTT CATGGCTCGG CGAGACTCTC GGCTGGCAAA TGCTCTCGGT TTGCTGCCAT GATTTTTCCA CCGGCACGAT GAGGGGTGGG GCGGGACGCG GTCGTCATTT GTCAAAAAAA CGTCAGGAAG GCGCCACGTC CACGGTCTTT ATCGCTGCCG CGCAGAAGGG GCTGAGCGAT GCCGCCGACG TCCGTACCAT CCCTTTCCCC GACGGCTCGG GAACCCTCTC CCTCTCCCGT CAATCCCTGG CCGAAAGTCA ATATTCCGAC GAGTTCTTTG GGGGAGTTGT CGAAAACCTT GCCCGTTCCC TGGCCGCTGC CCGGGAGTGC GACCGGCTCA AGAACCTTTC CATGCGCGAT CATCTGACCG GACTTTACAA CCGTCGGGTC TTCGAGGCGA TGCTGGAAGT CGAGGCCCGG AAGCGGACCA CAAAGCCGTT TTCGCTGCTT TTGATCGATC TCGACGACTT CAAACGCGTG AACGATACCT ACGGTCACGG AGCCGGAGAC CAGGTTCTCG TCGCCGTGGC GAAGATGCTG AGGCTCAGCT TCCGGAAGTC CGACGTCGTT TCCCGCTACG GCGGCGAGGA GTTCGGAGTG CTGCTCCCCG ATACGTCGCA GGATTCCGCC CGGGTGGTTG CGGAACGATT CCGGCAGAAT GTGGCGACGC TGTCGCTTCC CGTGAACAAA GAGAAGATAA TGCCGACGGT CAGTGTCGGA ATCGCCTCCG TGACGCTGCG CCTGGGAATT GAGGTTGCCG ATGTGATCGA AGAGGCCGAC CGGGCTCTCT ACCAGGCGAA GGTGACCGGC AAGAACCGCG TCTGCTCTTC CCTGCTGGGA GAGAATTCGT AA
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Protein sequence | MLQSHIMAGN CTVKPARMTR APYARHELKS TNSGCDESPA ALERRVAELL LVADFGAVVG SILDPRQVCE VASSWLGETL GWQMLSVCCH DFSTGTMRGG AGRGRHLSKK RQEGATSTVF IAAAQKGLSD AADVRTIPFP DGSGTLSLSR QSLAESQYSD EFFGGVVENL ARSLAAAREC DRLKNLSMRD HLTGLYNRRV FEAMLEVEAR KRTTKPFSLL LIDLDDFKRV NDTYGHGAGD QVLVAVAKML RLSFRKSDVV SRYGGEEFGV LLPDTSQDSA RVVAERFRQN VATLSLPVNK EKIMPTVSVG IASVTLRLGI EVADVIEEAD RALYQAKVTG KNRVCSSLLG ENS
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