| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2416 |
|---|
| Symbol | |
|---|
| ID | 3740454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2729096 |
|---|
| End bp | 2730523 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637779708 |
|---|
| Product | radical SAM family protein |
|---|
| Protein accession | YP_385366 |
|---|
| Protein GI | 78223619 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000137144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTC TGTTTCTCAA TCCACCCACC TACGAAGATT TCGACGGCGG AGCCGGCGCC
CGCTACCAGG CATCCCGGGA GGTGACCTCC TTCTGGTACC CCACGTGGCT CTGCTTCCCC
GCCGGGATGA TCGACGGCTC CCGGGTGGTG GACGCGCCGG TGCAACGTTT CACCATCGAC
GACTGCCTGG CCATTGCCCG TGATTTCGAC ATGGTGGTGA TGTACACCTC CACGCCGACC
CTGGCCCTCG ACATCGCCAC CGCCCGCCGC GTCAAGGAGC AGAAGCCGGC CACGGTTACG
GTCCTCACGG GCCCCCACGT TTCCGTTCTC CCCGAGGAGA CGCTGCGCCA GGGCGAAGGG
GTCATCGACA TCGTCTGCCG CGGCGAATTC GATTACACCA CCAAGGAACT CTGCGAGGGC
CGCGAGTGGG CAAAAGTGGA CGGGATCAGC TTCTGGAAGG ACGGGAAGAT CCACCACACC
CCGGACCGCC CGCCGATCCA AGACCTGGAC GCGCTCCCCT TCGTGGCTCC GGTTTACAAG
CGGGATCTTC CCATTGCGGA ATACGTCATA CCCCACTTCA AGAACCCCTA CGTCTCCATC
TACTCCAGCC GTGGCTGCCC CTCCAAGTGC ATCTACTGCC TCTGGCCCCA GACCTTCTCG
GGCCGGGCCA TGCGGACCCG CTCGCCCCAG AACGTCTACG AAGAGGTGAA GTGGATCGTC
GACAACATCC CCGAGATGCG GGAGCTCTCC TTTGACGACG ACACCTTCAC CGCCGACCGC
AAACACGCCC GCGAAGTGGC GGCCAAGCTG AAGCCCCTGG GGATTTCCTG GACCATCAAT
GCCCGGGCAA ACTGCGACTA CGAAACCCTC AAGATCATGC GCGAGGCAGG TCTCCGCCAC
GTGGTGGTGG GGTACGAGAC CGGCAACGAG CAGATCCTGA AGAACATCAA GAAGGGGGTC
ACCAAGGAGC AGGCCATCGA GTTCACGAGA AATTGCAAGA AGCTCGGCCT TTCCGTCCAC
GGCGCCTTCA TCATGGGGCT CCCTGGCGAG ACCCGCGACA CCATCCGCGA GACCATCGAG
TACGCCAAGG CCCTGGACCT CAACTCCATC CAGGCGTCAC TGGCCTCGCC GTACCCCGGC
ACCGAGTTCT GGGATCTCTG CCGGCAGGAA GGGTGGATCG CCTCCGAGGC CTATATCGAC
GACACCGGCC ACCAGATGTG CGTCATCAAC TATCCTCACC TCTCCAACAA GGAGATCTTC
GACGCGGTGG AGCTCTTCTA CAACAAGTTC TACTTCCGTC CCAAGTACAT CGGCCGCAGC
ATCATGAAGA TGATCGTGGA CGGCGAGGAG CGGAAGAAGC TCCTGAAGGA AGGGAAGCAG
TACCTGGAGT ACATGCGGAA GCGGAAAGCT GCCGGATCAT CCTGCTGA
|
|---|
| Protein sequence | MKPLFLNPPT YEDFDGGAGA RYQASREVTS FWYPTWLCFP AGMIDGSRVV DAPVQRFTID
DCLAIARDFD MVVMYTSTPT LALDIATARR VKEQKPATVT VLTGPHVSVL PEETLRQGEG
VIDIVCRGEF DYTTKELCEG REWAKVDGIS FWKDGKIHHT PDRPPIQDLD ALPFVAPVYK
RDLPIAEYVI PHFKNPYVSI YSSRGCPSKC IYCLWPQTFS GRAMRTRSPQ NVYEEVKWIV
DNIPEMRELS FDDDTFTADR KHAREVAAKL KPLGISWTIN ARANCDYETL KIMREAGLRH
VVVGYETGNE QILKNIKKGV TKEQAIEFTR NCKKLGLSVH GAFIMGLPGE TRDTIRETIE
YAKALDLNSI QASLASPYPG TEFWDLCRQE GWIASEAYID DTGHQMCVIN YPHLSNKEIF
DAVELFYNKF YFRPKYIGRS IMKMIVDGEE RKKLLKEGKQ YLEYMRKRKA AGSSC
|
|---|
| |