| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2403 |
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| Symbol | |
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| ID | 3740441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2716531 |
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| End bp | 2717334 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637779695 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_385353 |
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| Protein GI | 78223606 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0000143988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATA CGTTCGACGA ACTTCTGGCA AAGGGGATCA GTCTCGCTGA GGCGGGCGAC
TACACGGGTG CCGCCGCGCA GTTCAGGGAG TGCGTGGAGC GCGAACCCGA TAATGCCGAA
GGGTACTTTT ACCTTGGAGA AGCATTGAGC GAGGAGGGGA AGCTCCAGGA CGCCCTCAAG
GAATACGAGA AGGGGCTGAA GCTTGCTCCC GATGACCTCG ACGCCCTCAC CGCTGTGGGA
GACATCAAGT TCGAGCTGGG GCAGTACAAG GAGGCCCTGG CGGCCTACCA GCGGGTGGTG
GCGCTCGACC CTGACAACTC CGATGCCCAT GTGAACATCG GCCTTGTTTA CAATAGCCTG
GAGCGGACCC AGAAGGCGAT CAAGGCCTTC GAGAAGGCCC TTGAGATAGA CCCGGCCAAC
GTCTTTGCCT ACAACGGCCT TGGCGATGCC TGGTATGGCC TCGACGAGCA CGAGAAAGCC
ATCGCCGCCT TCCAGAAGGG GATCGAACTG GACCCGGACG ACGCCGCGGC CCACTTCAAC
CTGGGTGAGC TTTACTATGA CCTTGGCGAG CACGATGAGG CCGAGCATGA GTGCCTGGAG
GCCGTGCGGC TCGACCCCGC CTTCAGCATG TCGTATCTCA CCCTTGGCAG CCTCTATATG
GATAACGAGC GGGTCAAGGA CGCCATCAGG TACCTGGAAC TCTATCTCAG GCACGAGAAG
TCTCCCCAGG CCAAGGAAAC CGTTGCCGAG GTGCAGGCAG TGCTCGAAGG ACTCAGGGCG
GAAGTGGACT CGACTAATGG CTGA
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| Protein sequence | MADTFDELLA KGISLAEAGD YTGAAAQFRE CVEREPDNAE GYFYLGEALS EEGKLQDALK
EYEKGLKLAP DDLDALTAVG DIKFELGQYK EALAAYQRVV ALDPDNSDAH VNIGLVYNSL
ERTQKAIKAF EKALEIDPAN VFAYNGLGDA WYGLDEHEKA IAAFQKGIEL DPDDAAAHFN
LGELYYDLGE HDEAEHECLE AVRLDPAFSM SYLTLGSLYM DNERVKDAIR YLELYLRHEK
SPQAKETVAE VQAVLEGLRA EVDSTNG
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