| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2378 |
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| Symbol | |
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| ID | 3740055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2687765 |
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| End bp | 2689390 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637779670 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_385328 |
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| Protein GI | 78223581 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0367603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA TCGTTACCGA CGAGGTGGCT CAGGAAGGGT TGGCGCTTTT GGCCCAGGAC
CCGCGTGTGG AGATCAACAT CAAGCTGGGG CTCAAGAAGG AGGAGCTGCT GGCGATCATC
GGCAACTACG ACGCCATTAT CACCCGCAGT GGCACCACCG TTGACAAGAA TCTCCTCGAC
GCCGGCACAA AGCTTCGGCT CATCGCTAGG GCCGGGGTCG GCATCGACAA CGTGGATGTG
GACTACGCCA GTTCCCGTGG CGTAATCGTG GTGAACGCCC CCTTCGGCAA CACCAACAGT
GCCGCCGAGC ACGCCATGGC GCTGCTTCTT TCATTTTGCC GCAACGTACC CCGCGCCAAC
GGCAGCCTCA AGAGCGGTGA ATGGAAACGG GCCCCCTTCA CCGGCTACGA GCTCAAGGGG
AAAACCGCCG GCGTCATCGG CCTCGGCAAG GTTGGTGGAC GGGTCGCCAC CCGGCTCAAG
GCCTTCGAGT GCGAGGTTCT AGCCTGTGAC CCCTACATCG CCGTGAAGCG CGCCCATGAC
CTGGGGGTCA AGCTCGTCTC CCACGACGAG ATATACCGCA ACTGCGATAT CATCACCGTC
CACACCCCCC TCACCGATGA AACCCGCAAC ATGATCGGCG AGCGGGAGTT GGCCATGATG
AAGGACGGCG TCATCATCGT GAACGCCGCC CGGGGGGGGA TCATCGAAGA AGAGGCTCTC
CTGAAATATC TGGAATCGGG AAAAATTACC GGTGCCGCCA TCGACGTCTT CAGCGTTGAG
CCGCCGAAGA CCGACGTGCT GCAAAAACTC ATTGCCCACG AGCGGGTAAT TGTTACTCCG
CACCTGGGGG CCAATACCTT CGAGGCCCAG GTCAACGTGG CGGTGGACGT CTCCAAAGAG
ATCCTCAACT ACCTGGACGA CCTCCCCCTG GAGAACGCCG TGAACATCCC GCGCTTCGAC
CTGGCTCTCA TGGACCAGAT GCGGCCGTTC CTGAACCTCA TGAGTGTCAT GAGCGACTTC
GTCATTCAGC TTGTGGACGC CAATATCGAC ACCGTGACGT TCTCCTATGC GGGAAACATC
GCTCACTATG ACTGCACTCC TCTGAGTGTC TGCGGGCTGT CGTCGATCCT TAACCGGCTG
GTGGAGCAGG ACGTGAATAT GGTAAACGCC ACTCTCATTG CCGACCAGAT GGGGATTACC
GTGGAGGAGA ACAAGTCCAC CCAATCTCCC TCCTTCTCCA ACATGATAAC CCTCACCATC
GAGGGTAAAG GTGAAAAGCG GACTATTGCC GGCACACTCT TCGAAGGGAG CCCCCGCATC
GTCAAGCTCC GTGACTACCA GGTGGACTTC GCTCCGGACG AACACATGCT CAGCCTTACC
TATGAGGACC GGCCGGGGAT GATCGGCAAG ATCGGTACCA TCATGGGTGC CCACGATATC
AACATCGCCT CCATGAACCT GGGGCGCCGC GAGAAGCGGG GCGAGGCCAT GGTCATTCTT
TCTCTCGACT CGGCGGTTCC CCCCTTTGTC GTGGAGGAAG TTCGCAAGGC GACCGACGCC
ACTTTCATCA AACCGATCCA CATGCCGGGC GTCAAGTGCA GCCGTGGGTG CGGGTGCGGC
ATCTGA
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| Protein sequence | MKIIVTDEVA QEGLALLAQD PRVEINIKLG LKKEELLAII GNYDAIITRS GTTVDKNLLD
AGTKLRLIAR AGVGIDNVDV DYASSRGVIV VNAPFGNTNS AAEHAMALLL SFCRNVPRAN
GSLKSGEWKR APFTGYELKG KTAGVIGLGK VGGRVATRLK AFECEVLACD PYIAVKRAHD
LGVKLVSHDE IYRNCDIITV HTPLTDETRN MIGERELAMM KDGVIIVNAA RGGIIEEEAL
LKYLESGKIT GAAIDVFSVE PPKTDVLQKL IAHERVIVTP HLGANTFEAQ VNVAVDVSKE
ILNYLDDLPL ENAVNIPRFD LALMDQMRPF LNLMSVMSDF VIQLVDANID TVTFSYAGNI
AHYDCTPLSV CGLSSILNRL VEQDVNMVNA TLIADQMGIT VEENKSTQSP SFSNMITLTI
EGKGEKRTIA GTLFEGSPRI VKLRDYQVDF APDEHMLSLT YEDRPGMIGK IGTIMGAHDI
NIASMNLGRR EKRGEAMVIL SLDSAVPPFV VEEVRKATDA TFIKPIHMPG VKCSRGCGCG
I
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