Gene Gmet_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2348 
Symbol 
ID3738808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2654504 
End bp2655814 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content65% 
IMG OID637779640 
Productthree-deoxy-D-manno-octulosonic-acid transferase-like 
Protein accessionYP_385298 
Protein GI78223551 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1519] 3-deoxy-D-manno-octulosonic-acid transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTTC TGGTGTATGA CATACTACTG CTCCTCCTCT CCCCCCTGAT CCTTATCCAC 
CACGCGTGGC GGACGGTGAG CCGGGGGAGA AGTTTCGCCG GTTTCGGGGA GCGGTTCGGG
TGCATAGCGC CGGAGAGCCT CGCACGGGTT GCCGGCAAGG GGCCGATCTG GGTCCACGCG
GTGTCGGTGG GGGAAACCAT GGCGGTGAAG CCGCTCCTGC GGGAGCTGAA GCGCCGCTTT
CCCGAACGTC CCCTCGTGCT GTCATCGGTG ACGGAGACGG GGCGGTCGGT GGCGGTCACT
ATCCCCGAAG CGGATCTGGT GGTCTACTTC CCTTTTGATT TCGGCTTCGC CGTTGCCCGG
GCGCTTCGAC TCGTTGCGCC CTCGCTGGTC ATCGTGGTGG AAACCGAGAT CTGGCCCAAT
TTCCTCCGCC ACGCCCGCCG GACGGGGATC CCGTCAGTCA TGGTCAACGG CCGCATCTCG
GACCGTTCCT TCCCTCGCTA TCTCCGGTTC TCCCGCTTTT TTGCTCCCAT CCTGAACAAC
CTGTCAGCCC TCTGCATGCA GAGCAGCGAG GACGCCCGCC GCATAATCGC CGTCGGAGCG
CCTGCGGAGC GTGTCCACGT AACGCGCAAT CTCAAGTATG ATCTGCCTGT CAGATCGCTC
ACGCCGGCTG AGCGCCAGGA ACTGCTCTGC AGCTATCGCC TGCCTGCCGG CGCACTCATC
ATCACAGCGG GGAGCACCCA TGCCGGGGAA GAGGAGGTTG TGGCGGACAT CTATGCCCGT
CTCGCGGGAG AGAGATCTGA TCTCTTCCTG GTTCTTGTGC CGCGTCACCC GGAACGGGCC
GTCGAGGTGG GAACCCTCCT GGAGGGGAAA GGGATTCCCT TCGTGCGCCG TTCGGCCTTG
GACAAGGTTC AGGAGCAGCC ACGCGGCGGC GTTCTCCTAG TGGACACCAT CGGCGAACTG
ATGAAGCTCT ACGCCCTGTC GGACGTGGTG TTCGTGGGAG GGAGCCTTGT CCCGGTGGGG
GGGCATAACC TCCTGGAGCC GGCATCGGTG GGCGCGCCGG TCCTGTTCGG CCCCCACATG
CACAATTTCC GCGAGATCAC GGCCCTCGTG CTCGGTGCCG GAGCGGGAGA GCAGGTCAAC
GATCATGGGG AGCTGGAAGC GACCCTGCGC CGTCTGTTGG CCGATGAACC CGCCCGCCGG
TCCATGGGGG AGAACGGCAT CCGGCTCATG GCGGACCAGG GAGGCGCTGC CGCACGGCAT
CTGGAGATCA TCGGCCCGCT CATTGAGCGA GGTAGCGAGG TAGCGAGGTA G
 
Protein sequence
MIFLVYDILL LLLSPLILIH HAWRTVSRGR SFAGFGERFG CIAPESLARV AGKGPIWVHA 
VSVGETMAVK PLLRELKRRF PERPLVLSSV TETGRSVAVT IPEADLVVYF PFDFGFAVAR
ALRLVAPSLV IVVETEIWPN FLRHARRTGI PSVMVNGRIS DRSFPRYLRF SRFFAPILNN
LSALCMQSSE DARRIIAVGA PAERVHVTRN LKYDLPVRSL TPAERQELLC SYRLPAGALI
ITAGSTHAGE EEVVADIYAR LAGERSDLFL VLVPRHPERA VEVGTLLEGK GIPFVRRSAL
DKVQEQPRGG VLLVDTIGEL MKLYALSDVV FVGGSLVPVG GHNLLEPASV GAPVLFGPHM
HNFREITALV LGAGAGEQVN DHGELEATLR RLLADEPARR SMGENGIRLM ADQGGAAARH
LEIIGPLIER GSEVAR