Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2330 |
Symbol | |
ID | 3739491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2637313 |
End bp | 2638323 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637779622 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_385280 |
Protein GI | 78223533 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000000244593 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGG TTCTCGTCAC CGGCGCCGCC GGCTTCATCG GATTTCACCT CTCCCAGAGA CTCCTCGCTC GGGGCGACCG CGTGGTGGGT CTCGACAATC TCAACGACTA CTACGATGTA AATCTGAAGC TGGACCGGCT TCGCCAGTTG GAGGGGCGGG AGGGGTTCCG TTTTATCCGG GCGAGCCTGG CTGACCGACC GGCCCTGGAA GAGCTCTTTA GCGGCGAGCG CTTCGACGCG GTGGTGAACC TAGCGGCCCA GGCCGGGGTC CGTTATTCCC TCAAGAATCC CCACGCCTAC GTGGAGAGCA ATCTGGTCGG CTTTATGAAC ATCCTGGAAG GGTGCCGCCA CCACGGCGTG AAGCATCTGG TCTACGCCTC GTCCAGCTCC GTCTACGGGG CCAACACGGC CATGCCCTTT TCAGTCCACC ACAACGTGGA CCATCCGGTC TCCCTCTACG CGGCCACCAA GAAGGCCAAC GAACTCATGG CCCACACCTA TTCGAGCCTC TACGGACTTC CTACTACGGG ATTGCGGTTC TTCACGGTTT ACGGACCCTG GGGGCGGCCC GACATGGCGC TCTTCCTCTT TACCAAGGCT ATCCTTGAGG GGCGTCCCAT AGACGTCTAC AACCACGGCA AAATGCAGCG GGACTTCACC TACATCGACG ACATCGTCGA GGGGGTCATG CGGGTCATGG ACCGGACCGC CGAGCCCAAC CCATCCTGGA GCGGCGACCA TCCCGACCCG GGCACCAGCT ACGCCCCCTA CCGGATCTAC AACATCGGCA ACAACAGCCC GGTGGAGCTC TTGACGTTCA TCGAGACCAT CGAGAAGTGC ATCGGCAAGC CGGCGGAGAA GAACTTCCTC CCCATTCAGG CGGGGGACGT GCCGGCCACC TACGCCGACG TGGACGATCT GATGAACGAT GTGGGTTTCA AACCGGCCAC TCCCATCGGG GAAGGGATAC GGCGGTTTGT TGAGTGGTAT CGGGAGTATT ACCATGTCTG A
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Protein sequence | MSTVLVTGAA GFIGFHLSQR LLARGDRVVG LDNLNDYYDV NLKLDRLRQL EGREGFRFIR ASLADRPALE ELFSGERFDA VVNLAAQAGV RYSLKNPHAY VESNLVGFMN ILEGCRHHGV KHLVYASSSS VYGANTAMPF SVHHNVDHPV SLYAATKKAN ELMAHTYSSL YGLPTTGLRF FTVYGPWGRP DMALFLFTKA ILEGRPIDVY NHGKMQRDFT YIDDIVEGVM RVMDRTAEPN PSWSGDHPDP GTSYAPYRIY NIGNNSPVEL LTFIETIEKC IGKPAEKNFL PIQAGDVPAT YADVDDLMND VGFKPATPIG EGIRRFVEWY REYYHV
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