| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2329 |
|---|
| Symbol | |
|---|
| ID | 3739490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2636313 |
|---|
| End bp | 2637320 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637779621 |
|---|
| Product | UDP-galactose 4-epimerase |
|---|
| Protein accession | YP_385279 |
|---|
| Protein GI | 78223532 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00335064 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGG TCAGGAAAGG AGAAGGGATG ACTGTTCTCG TTACTGGCGG TGCCGGGTAC
ATCGGGAGCC ATGTGGTCCG ACAGCTTTCC GAGGCCGGCT ATACCGTGGT TGTCTACGAC
AATCTCTCCA CCGGCTTCGC CGACGCCTTG GTGCATGGCG AGCGGCTTGT TGTGGGTGAG
CTGGCTGATT CTGACCGGCT TGATGCCCTC TTCGCAGAGC ACGGGTTCAA GACGGTGCTC
CATTTCGCAG CCTCCATCGT GGCGCCCGAG TCGGTGACCG ATCCCCTCAA GTATTACAGC
AATAATACCC GCAATACCCT CAATCTCCTC ACGGCCTGCG TGAAGCATGG GGTCGAGCGG
TTCATCTTCT CCAGTACCGC GGCGGTGTAC GGCATGCCCG AGAACGGCAT TGCTGCGGAA
GAGAGTCCCA CAGTCCCCAT CAACCCCTAT GGCACGTCGA AGCTCATGAG TGAATGGATG
CTCCGCGACG TCTGTGCCGC CCATGGCATG CGCTCGGTGG CGCTACGCTA CTTCAACGTG
GCGGGGGCAG ACCCCCAGGC CCGGATGGGA CAGCGGACCC CGGAGGCGAC CCACCTCATC
AAGGTCTCCA GCCAGGCCGC CCTGGGGATG CGGGAGAAGG TCTCCATCTT CGGCACCGAC
TACGCCACCC CCGACGGCAC CGGCATCCGC GACTACATCC ACATTGAGGA TCTTGCCTCA
GCCCACCTGG CTGCCCTGGC GTATCTGGAA AGGGGCGGGG AGACGACGCG GATCAACGTC
GGTTATGGCA AGGGGGCCAG CGTCCGTGAG GTGATCGAGA TGGTGCGCCG GGTGTCAGGA
GTCCATTTCC CGGCCGAGGA AGCTCCCCGG CGTCCCGGCG ATCCGGCCAT GCTGGTGGCA
AAGGCGGACC GGGCCAGGAC GGTCCTCGGC TGGACCCCGC ACTATGACGA TCTTGAAACC
ATTGTCGCCG ATGCGTGGCG ATGGGAAGCT AAACTCAACA AACGGTGA
|
|---|
| Protein sequence | MSEVRKGEGM TVLVTGGAGY IGSHVVRQLS EAGYTVVVYD NLSTGFADAL VHGERLVVGE
LADSDRLDAL FAEHGFKTVL HFAASIVAPE SVTDPLKYYS NNTRNTLNLL TACVKHGVER
FIFSSTAAVY GMPENGIAAE ESPTVPINPY GTSKLMSEWM LRDVCAAHGM RSVALRYFNV
AGADPQARMG QRTPEATHLI KVSSQAALGM REKVSIFGTD YATPDGTGIR DYIHIEDLAS
AHLAALAYLE RGGETTRINV GYGKGASVRE VIEMVRRVSG VHFPAEEAPR RPGDPAMLVA
KADRARTVLG WTPHYDDLET IVADAWRWEA KLNKR
|
|---|
| |