Gene Gmet_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2318 
Symbol 
ID3740473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand+ 
Start bp2626564 
End bp2627217 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID637779610 
Productthymidylate kinase 
Protein accessionYP_385268 
Protein GI78223521 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0629646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTT TCATCACATT CGAAGGAATC GAGGGATGCG GCAAGTCGAC CCAGGTCCGA 
CTGGTCGCCG AACGGCTCAG CCGGGCCGGC CACGGGGTGG TGGTGACCCG CGAACCGGGA 
GGATGCCCCA TCGCCGACGC CATCAGGGCA ATTCTTCTGG ACGCCCGCAA CAGCGCCATG 
GTGCCCATGG CCGAACTCCT CCTCTACGCG GCGGCCCGGG CCCAGCACGT GGCGGAGGTG 
ATCGAACCGG CCCTGGCAGC GGGGAAGATC GTCCTCTGCG ATCGCTTCAC CGACTCCACC 
ATGGCCTACC AGGGATTCGG CCGCAAGCTG GACCGGGAAC TGATTGCCCA GCTCAACAGC 
CTGGCCGCCG GCAGCATCAG ACCGGATCTG ACCCTCCTTC TGGACTGTTC CGTGGAGACG 
GGGCTCGCCC GGGCCATGGC CCGGATCAAC ACAAGCAGCG CGGCCCGGGA GGAGCGGTTC 
GAGCAGGAGT CCATCCTCTT CCACGAGCGG ATCAGGGACG GCTTCCTCTC CCTCGCCGCT 
GCCGAACCGG GGCGGTTCGT GGTTCTGGAC GGCAGTGGCG GCATCGAAGA GACCGAGGCC 
CTCGTGACGG AGGCGATCCT TGCCCGCCTT CCCGCATCCC CTGCAAGGAG GTAG
 
Protein sequence
MGFFITFEGI EGCGKSTQVR LVAERLSRAG HGVVVTREPG GCPIADAIRA ILLDARNSAM 
VPMAELLLYA AARAQHVAEV IEPALAAGKI VLCDRFTDST MAYQGFGRKL DRELIAQLNS 
LAAGSIRPDL TLLLDCSVET GLARAMARIN TSSAAREERF EQESILFHER IRDGFLSLAA 
AEPGRFVVLD GSGGIEETEA LVTEAILARL PASPARR