| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2301 |
|---|
| Symbol | |
|---|
| ID | 3740456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2608733 |
|---|
| End bp | 2610862 |
|---|
| Gene Length | 2130 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637779593 |
|---|
| Product | cytochrome c family protein |
|---|
| Protein accession | YP_385251 |
|---|
| Protein GI | 78223504 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGCC TGTTCATTCC CGCCATGCTG CTCCTCCTTC TGCCGGTGCT CCTCTTTGCC
AAGGATTACC AGGTTGTTAC CTTCAAGACC GACACCGCCG GTGCCATTAA CTTCAGCCAT
CCCGTCCACC TGAAGGCCCT CGGCAACAAC TGCACCCTCT GCCACAACAA GATCTTCACG
ATCGGCACCA AGTCGGCGCC GGTGACCATG AAGGAGATGG AGGCGGGCAA GTCCTGCGGC
GCCTGCCACA ATGCGAAGCG AGCCTTCGCC CTCGGCGAGT GCACCCGCTG CCACGTGACA
AAGGAGGTGC CGGTCGATAT CCCCAATTTC GGCGCCGTCA TTTTTAGTCA CAAATTCCAC
CTGGGGCTCG GCGCCTACGG TTGCGCCGAC TGCCACAACG CCATCTTCGG CGCCCGTACC
GATAACCCCC ACATTACCAT GAAGGAGATG GAAGGGGGAC GTTCGTGCGG TGCCTGCCAC
GACGGCAAAA CCGCCTTCTC GGTCAAGGGG GACTGCACCA AGTGCCACAC GGTGCGGGAT
ATCCCTTTTG CTGCCGACGC CACCTTCAGC CACGCTGCCC ACTTGGGATT CGGCCATGTC
TGTGGCGACT GCCACAGCAA GCTCTTTGTG GCCGGCCCCA AAAGCAAGCG CTACACCATG
CTGGAGATGG AGACCCAGCA GTCGTGCGGC GGTTGTCACA ACGGCAGTAC CGCCTTCTCG
GTCAAGGGGG ACTGCGGCCG GTGTCATACG GCTGTCAGGG ATGTGACCTT CGCGAAAAGC
GATGCATTCT TCAGCCATAA GATCCATACA GCTCTGCTGG GGTGTGGCAG CTGCCACAGC
GGTATCTTCG TCGGTGGCGT CAACAGCCGC CGCTACACCA TGGCCGAAAT GGAGAAGGGA
CTCTCCTGCG GGGTCTGCCA CGAGGACAAG ACCGTCTTCG GCGTCCGGGG CAACTGTGAC
CGCTGCCACG TGAAGACGCG GAATGTGAGC TTCAAGACGG GGGCTGCCGG CACGGTTGCC
TTCCGGCACG ATTTCCACCG CCAGATGTAT GGCTGCGGAG ACTGTCACAA CGGCATCTTC
ACCGCCGGTG CGGGGCGCAA GAGCTTCACC ATGGCCGAGA TGGGGCAGGG AAAATCGTGC
GGCGCCTGCC ATGACGGCAA GACCGCCTTT GCCGCCACTA CTGCCGCCAA CTGTGGCAAA
TGCCATCCCC TGCGGGATGT GATCCTTCCC CACGATGCCC GTTTCCCCCA CGTGAAGCAC
CTGGAATCCC AAACCTGCAG CGACTGCCAT AACGGGCTCT TCCTCTCCGG TCCCGGAAAC
AAGCGCTGGA CCATGGCGCA GATGGAGCAG GGCAATTCCT GTGGCGCCTG CCATGACGGC
TCGATCGCCT TCACCGTCAA GGGATCGTGC GGCACCTGCC ATACCTCCAC CGTGGAGGTG
GCGATTCCGG TCCGCCAGAC GGGAGTCACC CGCTTCAGCC ACACGTTCCA CGCAGGCCTC
CATGGCTGCA CCGATTGCCA TAACGGGATC TTCGGAGCCG GCGCATCGGC CAGGCGCCAC
ACCATGGCCG ACATGGAGAA AGGGGGCTCG TGCGGCGCCT GCCACGATGG GAAAAGCGCC
TTCACCGTGA AGGATAACTG TACCAAATGC CATCCGGTGA AGGAGATCTC CTTCAAGGAA
CCGGGCGCTC TCTTCAGCCA TACCTTCCAC CTCAACGCCT ATTCGTGCGC CGACTGCCAC
GATGCCCTCT TTAAGCCTGA TTCCGAGAAC CGGCGCTGGA CCATGGCCGA CATGGAGAAG
GGCAAATCGT GCGGCGCCTG CCATGACGGC AAGAGTGCCT TTGGCGTCGC CGGTGCCTGC
GAGAAGTGCC ATCCGGCCAC CAAGGGGATC AAGTACGAGC TTCCCGGCGA TGTGGGGAGC
GTCCTCTTCA GCCATAAATC CCACTCCGCC AAGGGATACG GTTGCGTTGA CTGCCACAGC
AAGATTATCG TGGCCGGCGC CGGGAGGAAA TCCCATACCA TGAAGGAGAT GGAGCAGGGA
CAGTCGTGCG GCGCCTGCCA CGGTTTCAGC ATGGCCTTCA GTGTTAAGGA TCCCATCCAC
TGCGAGAAGT GTCACCAGAG GCTCTATTGA
|
|---|
| Protein sequence | MKRLFIPAML LLLLPVLLFA KDYQVVTFKT DTAGAINFSH PVHLKALGNN CTLCHNKIFT
IGTKSAPVTM KEMEAGKSCG ACHNAKRAFA LGECTRCHVT KEVPVDIPNF GAVIFSHKFH
LGLGAYGCAD CHNAIFGART DNPHITMKEM EGGRSCGACH DGKTAFSVKG DCTKCHTVRD
IPFAADATFS HAAHLGFGHV CGDCHSKLFV AGPKSKRYTM LEMETQQSCG GCHNGSTAFS
VKGDCGRCHT AVRDVTFAKS DAFFSHKIHT ALLGCGSCHS GIFVGGVNSR RYTMAEMEKG
LSCGVCHEDK TVFGVRGNCD RCHVKTRNVS FKTGAAGTVA FRHDFHRQMY GCGDCHNGIF
TAGAGRKSFT MAEMGQGKSC GACHDGKTAF AATTAANCGK CHPLRDVILP HDARFPHVKH
LESQTCSDCH NGLFLSGPGN KRWTMAQMEQ GNSCGACHDG SIAFTVKGSC GTCHTSTVEV
AIPVRQTGVT RFSHTFHAGL HGCTDCHNGI FGAGASARRH TMADMEKGGS CGACHDGKSA
FTVKDNCTKC HPVKEISFKE PGALFSHTFH LNAYSCADCH DALFKPDSEN RRWTMADMEK
GKSCGACHDG KSAFGVAGAC EKCHPATKGI KYELPGDVGS VLFSHKSHSA KGYGCVDCHS
KIIVAGAGRK SHTMKEMEQG QSCGACHGFS MAFSVKDPIH CEKCHQRLY
|
|---|
| |