Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2271 |
Symbol | |
ID | 3741557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 2574639 |
End bp | 2575652 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637779562 |
Product | hypothetical protein |
Protein accession | YP_385222 |
Protein GI | 78223475 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000000219474 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.000127881 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGATATCAG GCCGCCAAGG AAGATTGACC CACTGCCTAT ATAGGGTCAT TTTTCAAAGC CGATTAACAG ACATCCATGA AGCGCACTAC CACCATGAAG CATTGCTCTT TGACAACGAG GAGAAGGAAC AAGGAACCAT CATCAGAAAA CCCGGCTCCA GGAAGCTCTA TATCCTCTTC TACTACTTCA ACCGCCGGGT GGAGAAAACG ACCGGCCTTG CCGACACGAA GAAGAACCGG GAGAAGGTCC GGCTCTGGCT GGATCGGATC ATCGAACGTA GGGACGCGGG TAAGCTCATC TTTGCCGATG CCTTCCCCGG CGCACCAGAA AACGAGAAGG CATACTTTGC CAAGCTGGAG GGGTGGCAGT ATGCCCCGGA ACCGCGGGAC ATCCTCTTTG GGGCGTATCT CCAGGAGTGG TATCAAAACG TCTGGAGCCA TTACCCGGAG GGGACCAAGA AGGACGACTA CCGGCTGATT ATCGACTATT GGCTGGTGCC GTTCTTTGGG GAGATGACCT TCTTCCAGAT CAGCGGGGTG GAGATTCAGA AGTTCATTGC CTCCCTCAAG TGGAAGAAGG GGACCAAGAA GGGACAACCC TTATCGAAGG CCAGGGCGAA GAATATCCTG ATACCGCTAC GCACCATCTG GAACGATGCC TGCGACCAAT ACCGTTGGGT ACTCCACAAC CCCTTCACCA ACCTGAAGAA GCACCTTCCC AAGACCCAAC CGAAACGACG GGAGGGATTC CGGTTCGATG AATGGCGGGA ATTCCTGAAG GATGTCTGGA CCAAGGCGGG GAAAGCCAGC GGGATAACCG ACAAGGTGCC CTATTCCATG CGCCACTCCT TCGCGGCCTG GGCGCTTACC TTGCGGATCG ATCTAAACCG GCGGGTGCGG CTCATGGGCC ACGGTTCCAA GAAAATGGTC TATGAGGTCT ACGGGGATTA CATCGACGGG CTGGAGGAGG ACTTCTGGAA GATTCTGGAA TACTTCGGCC GGGACTGGTG TTAG
|
Protein sequence | MISGRQGRLT HCLYRVIFQS RLTDIHEAHY HHEALLFDNE EKEQGTIIRK PGSRKLYILF YYFNRRVEKT TGLADTKKNR EKVRLWLDRI IERRDAGKLI FADAFPGAPE NEKAYFAKLE GWQYAPEPRD ILFGAYLQEW YQNVWSHYPE GTKKDDYRLI IDYWLVPFFG EMTFFQISGV EIQKFIASLK WKKGTKKGQP LSKARAKNIL IPLRTIWNDA CDQYRWVLHN PFTNLKKHLP KTQPKRREGF RFDEWREFLK DVWTKAGKAS GITDKVPYSM RHSFAAWALT LRIDLNRRVR LMGHGSKKMV YEVYGDYIDG LEEDFWKILE YFGRDWC
|
| |