Gene Gmet_2259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2259 
Symbol 
ID3738076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2559034 
End bp2559816 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content47% 
IMG OID637779550 
ProductIclR family transcriptional regulator 
Protein accessionYP_385210 
Protein GI78223463 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.10057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0000000211035 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGACAA GAGATTATAC AATTCAATCG GTTAGGCATG CACTCGATAT CCTGGAACAA 
TTTCGCGGGA ATTCGTCCGA GCTGTGTGTG ATGGATTTGA GTCGGAGGTT ACAGCTCCCA
AAAAACAAAA TTTACAAACT GATAGCAACA CTCGAACATC ACAATTATCT GGAACAAAAC
ATAAGCACAA AGAACTATCG CCTCGGTATA AAAAATATGG AACTTGGGCA GGTAGCGATG
CGACGAATGC GGCGACTTGG AGATTCCAGG TCGGTCATGG AGGCACTTGT CAGGGAATGC
AACGAAACCC TGTGTGTATC AATACTCAAA GGTTCTCATG CGGTTAACAT GGATGCAGTC
GTGGGAGACA ACCACTTGCG GGCAATTCCC CCTATTGGCA TAAGTATTCC TGCACACTGC
ACGGCTGCCG GGAAGGTACT AATCGCCGGT CTAACAGAGG AGCAGCGGTT GCACTATGTT
TCTAGCTGTT TGTTCAAGCG TTACACAACG GCAACTATAA CCAATCCGAA ACTGTTTCTG
CGACATCTGG AAGAAGTTGA CCGGCAAGGG TATGCCCTCG AGTTGGAGGA ACAGGAAGTT
GGAGTTAAAT CGGTTTCGGC CCCGATACGG GACTACACGT CAAGGACAAT TGGCGCGATT
ACCGTGTACG GACCATCCAC GCGATTTCCT GATGACCGAA TGGAAAAAGA ATTGATTCCG
CTTGTTCTCA AGGGAGCAAT GGAAATTTCG GACATGTTGG GATATCGACA AAGTGAATTC
TGA
 
Protein sequence
MKTRDYTIQS VRHALDILEQ FRGNSSELCV MDLSRRLQLP KNKIYKLIAT LEHHNYLEQN 
ISTKNYRLGI KNMELGQVAM RRMRRLGDSR SVMEALVREC NETLCVSILK GSHAVNMDAV
VGDNHLRAIP PIGISIPAHC TAAGKVLIAG LTEEQRLHYV SSCLFKRYTT ATITNPKLFL
RHLEEVDRQG YALELEEQEV GVKSVSAPIR DYTSRTIGAI TVYGPSTRFP DDRMEKELIP
LVLKGAMEIS DMLGYRQSEF