Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2259 |
Symbol | |
ID | 3738076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2559034 |
End bp | 2559816 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637779550 |
Product | IclR family transcriptional regulator |
Protein accession | YP_385210 |
Protein GI | 78223463 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.10057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000000211035 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGACAA GAGATTATAC AATTCAATCG GTTAGGCATG CACTCGATAT CCTGGAACAA TTTCGCGGGA ATTCGTCCGA GCTGTGTGTG ATGGATTTGA GTCGGAGGTT ACAGCTCCCA AAAAACAAAA TTTACAAACT GATAGCAACA CTCGAACATC ACAATTATCT GGAACAAAAC ATAAGCACAA AGAACTATCG CCTCGGTATA AAAAATATGG AACTTGGGCA GGTAGCGATG CGACGAATGC GGCGACTTGG AGATTCCAGG TCGGTCATGG AGGCACTTGT CAGGGAATGC AACGAAACCC TGTGTGTATC AATACTCAAA GGTTCTCATG CGGTTAACAT GGATGCAGTC GTGGGAGACA ACCACTTGCG GGCAATTCCC CCTATTGGCA TAAGTATTCC TGCACACTGC ACGGCTGCCG GGAAGGTACT AATCGCCGGT CTAACAGAGG AGCAGCGGTT GCACTATGTT TCTAGCTGTT TGTTCAAGCG TTACACAACG GCAACTATAA CCAATCCGAA ACTGTTTCTG CGACATCTGG AAGAAGTTGA CCGGCAAGGG TATGCCCTCG AGTTGGAGGA ACAGGAAGTT GGAGTTAAAT CGGTTTCGGC CCCGATACGG GACTACACGT CAAGGACAAT TGGCGCGATT ACCGTGTACG GACCATCCAC GCGATTTCCT GATGACCGAA TGGAAAAAGA ATTGATTCCG CTTGTTCTCA AGGGAGCAAT GGAAATTTCG GACATGTTGG GATATCGACA AAGTGAATTC TGA
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Protein sequence | MKTRDYTIQS VRHALDILEQ FRGNSSELCV MDLSRRLQLP KNKIYKLIAT LEHHNYLEQN ISTKNYRLGI KNMELGQVAM RRMRRLGDSR SVMEALVREC NETLCVSILK GSHAVNMDAV VGDNHLRAIP PIGISIPAHC TAAGKVLIAG LTEEQRLHYV SSCLFKRYTT ATITNPKLFL RHLEEVDRQG YALELEEQEV GVKSVSAPIR DYTSRTIGAI TVYGPSTRFP DDRMEKELIP LVLKGAMEIS DMLGYRQSEF
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