| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2245 |
|---|
| Symbol | |
|---|
| ID | 3738199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2539017 |
|---|
| End bp | 2540075 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637779537 |
|---|
| Product | BNR repeat-containing glycosyl hydrolase |
|---|
| Protein accession | YP_385197 |
|---|
| Protein GI | 78223450 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0000222416 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00000000000000277962 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCGA AAATATTAAA GACATCGTTA TGTTTCATTT TCATGACTTG TTGGGTGACA
ACGGCACAAG CATTCAAAGG ACCGCTTGAG ACCCCTGCGT CTATGAAGCT CCATGCGACG
ACTAGCCAAC TCACTGCGGT TACCCGTAAT GGTAATAGAC TTGCTGCAGT CGGGGCGAGG
GGGCTCGTTC TTCTTTCGGA CGACAATGGG AAAAAGTGGC AACAGGTTGC TGTGCCGGTC
AGTTCGAATC TTGTGTCAGT GCAGTTCCCG GTGCCTGATC AAGGCTGGGC TGTCGGCCAT
GATGGTGTCG TTTTGCATAG TGGTGACGGT GGACGTACCT GGTCCAAACA GCTTGACGGC
AATCAGGTGG CCAAGATAAT GCTTAAACAT TACGAAAAAC TGGCTGCAGA GGGAGATGCC
GCTGCCTCCA AGATTCTTCC AGATATTCAA CGTATTTTAC AGGAAGGGGC CGATAAGCCC
TTTATGGATG TTTGGTTTCT TGATGAGAAA GAAGGTTTTG TTGCCGGTGC ATTTAATCTG
ATTATGCATA CAACCGATGC CGGTAAGACG TGGGTGCCCC TGTTTGAGCG CACAGATAAC
CCAAAAAACT TGCACATTTA TGCACTCAAG GGGGTTGGTA AGGAAGTTTA TCTTGCCGGC
GAGATGGGGA TGTTGCGTCG CTGGGACCGC GCCAGCCAAC GTTTTGTGAC AATAGCATCT
CCGTACAAAG GAACTTTTTT CGGGCTGTTG GCAAAAGATA CGACCATCCT TGCATTCGGC
CTGCGTGGCA ACGCATTTCG CAGCAGCGAC CGCGGGAATA CATGGCGCAA GTTGAATACC
AATACCACTG CTGGACTTAC GGGAGGAACA TTTCTCGATG ATGGCCGTGC TGTTTTGGTG
AGTCAGGACG GGCAGGTTCT GGTGATTGAC GTTGGCAGCG AAACATTTGT GCCCGCGAAG
GTTTCAAGTC CAATGGCCTT TTCCAGTGTG GCACCAGCTG GCAAGAATGG CATTGTTGCG
GTGGGTTCGC GGGGTGTCAT AACTGAATCA CTTAAATAG
|
|---|
| Protein sequence | MLSKILKTSL CFIFMTCWVT TAQAFKGPLE TPASMKLHAT TSQLTAVTRN GNRLAAVGAR
GLVLLSDDNG KKWQQVAVPV SSNLVSVQFP VPDQGWAVGH DGVVLHSGDG GRTWSKQLDG
NQVAKIMLKH YEKLAAEGDA AASKILPDIQ RILQEGADKP FMDVWFLDEK EGFVAGAFNL
IMHTTDAGKT WVPLFERTDN PKNLHIYALK GVGKEVYLAG EMGMLRRWDR ASQRFVTIAS
PYKGTFFGLL AKDTTILAFG LRGNAFRSSD RGNTWRKLNT NTTAGLTGGT FLDDGRAVLV
SQDGQVLVID VGSETFVPAK VSSPMAFSSV APAGKNGIVA VGSRGVITES LK
|
|---|
| |