| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2229 |
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| Symbol | |
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| ID | 3738183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2522533 |
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| End bp | 2524074 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637779521 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_385181 |
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| Protein GI | 78223434 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0776358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000000170623 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTGGG CAGACTACCT TGAGTGGGGA ACACGAGAAA ATCCGCACAA GCCGCTAGTG
TACTGTAACG ACAAAATTGT CACTTATGGA GAAATGAGTT CCTGGACAAA CTGTATCGGT
AATGTGTTGG CTGACCTTGA CGTATCCAAG GGAGAGCGTG TTGCCACATA CCTGCCGAAC
ACACCGGAGC ATGAAGCGGT GCTGCTTGGA GCACTGAAAC TAGGTGCTAT CGGCTGTCCC
CTCTCAATGC GCGAAAACAA TGTTATTGTT ATTGACCTGC TCCGGGGGCT TGAGGCTAAG
GTCCTCGTCG TAGGAGCTGA GTCCGTCGAG TTTGCACGCG AGGTGCTTCA GGAACTCCCT
GAACTCAAAA TACTGATGGC AGATGATGCT TCCCTTGGCT TTCTCTCTCT GGGCGAACTG
GTCGGTACCG CTTCCGCGGA ATTAGAGACG CTTCCTATGC GCGACAGTGA GGTGGCCTTT
ATTGCCTATA CGGGGGGCAC CACCGGGCGG CCAAAGGGCG TTCAACTGAC TGCCGGGATG
CTCCGGGCGC ACAACTATGT ATGGTACGAG CGATACCAGT TGAGCCGTGC TTCTGAGGTA
TTCTTCGGCT GTCTCAGCCT ATGGCATGTC GGTGGAGTTT TGGATGCCAT GGCCTTGTCT
TATACTACCG GCGCTTCCCA TGTCCTTCTT CCGAAATGGA ATCCGGTGAC GGCCCTTCAC
TTGGTGAAGA AACATCGTGT TACCTGTATG ATCGCGGCTA CGACACTGTA CCAACAGATG
TCACGCTGTG ACGAGTTTTT AACCACCGAT TGCTCAAGCC TCAAAATATG TGCAGTTGGT
GGGGAGCCAG TCCCGGTAGA ACTCAAGGAG CGGTGGTTTC GTGTGACAGG GGCGTCCATG
CGCGAAGGTT TCGGAATGAG CGAGGCGTGC ACGCAGGTCT TTGCTCCAGG AAAGGACGCT
CCTCTCTCTT CGTGCGGCAA ACCGTTTGAC CGGATTGAAG AAGTTCGACT TGTTGATCCA
GAAAGCCGCT GTGTTATCGA AGGTGCAGGT TCTGGCGAGC TTGCCGTGCG GGGTGACAAC
GTAACTCCAG GTTATTGGCA TGATCCGGAA CAGACGGGAC GAAAATTCGA TGCGGAGGGG
TGGTACTATA CCGGTGACAT GGTGAGGCGG GACGAAGATG GCTATTATTA CACCGTCGGT
CGAGTCGATG ACATGTTCCA ATCGGGTGGA GAAAACGTTT ATCCGTCGGA AATTGAGGCT
GCCCTTGTTC TCCATCCAGA TGTCACCAAG GCTTTTTGTT TTCCGGAACC TCACACTGAA
TGGGGGAAGG CTGCGTGCGC GGTTGTCGAA CTTCGCCCGG GAGCCACGTC CAATGCGGAG
AGAATTCTGG AGTTCTGTAC TACACACTCG ACACTGGCGC GCTTTAAGCG CCCTCGCCGA
ATCTTCTGCA TTGATGAACT TCCCATCGGG GCAACCGGCA AGGTACTCCG CCGACAGGTT
AAGGAATGGC TTGCCGCGCA AGGGTATCAT GCCGAATTCT GA
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| Protein sequence | MNWADYLEWG TRENPHKPLV YCNDKIVTYG EMSSWTNCIG NVLADLDVSK GERVATYLPN
TPEHEAVLLG ALKLGAIGCP LSMRENNVIV IDLLRGLEAK VLVVGAESVE FAREVLQELP
ELKILMADDA SLGFLSLGEL VGTASAELET LPMRDSEVAF IAYTGGTTGR PKGVQLTAGM
LRAHNYVWYE RYQLSRASEV FFGCLSLWHV GGVLDAMALS YTTGASHVLL PKWNPVTALH
LVKKHRVTCM IAATTLYQQM SRCDEFLTTD CSSLKICAVG GEPVPVELKE RWFRVTGASM
REGFGMSEAC TQVFAPGKDA PLSSCGKPFD RIEEVRLVDP ESRCVIEGAG SGELAVRGDN
VTPGYWHDPE QTGRKFDAEG WYYTGDMVRR DEDGYYYTVG RVDDMFQSGG ENVYPSEIEA
ALVLHPDVTK AFCFPEPHTE WGKAACAVVE LRPGATSNAE RILEFCTTHS TLARFKRPRR
IFCIDELPIG ATGKVLRRQV KEWLAAQGYH AEF
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