| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2226 |
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| Symbol | |
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| ID | 3738180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 2518351 |
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| End bp | 2519136 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637779518 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_385178 |
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| Protein GI | 78223431 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0121072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00000459382 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGAAAAC TCGCCGGAAA GGTGGCAATT ATTACCGGTG GATCGCGCGG CATGGGTCGG
GCTACTGTCG AGGTTTTCAC TAAAGAAGGC GCCAGGGTAA TCATCGCAGA TGTTCTTGAT
GCCGAAGGAA CGGCACTGGC ACAAGAGATG GGAGACGGCG CAATTTACCG CCATCTTGAC
GTATCAGACG AAAGGGGATG GGGAGATGTG GCAAGAAGTG CGATAGATTC ATTCGGCCGC
ATCGACATAC TTGTCAATAA CGCCGCCATC TTTTTATACG CATTAATTGA CGAAACCAGG
AGCGAAGCCT TCAGGCGGTT ACTCGACATC AACGTTATCG GCCCTTACCT TGGAATGAAA
ACGGTAATCC CGATCATGAA AAAACAGCGG TCAGGGTCCA TCGTCAATGT CTCATCCACG
GACGGTCTGC GCGGGTCCTG CGGCATGGGG GCCTACAATG CCAGCAAGTG GGGGGTCCGT
GGCCTTACCA AGTGTGTAGC CATGGAAGTG GGCCCCTTCG GTATCAGGGT CAATTCACTC
CATCCCGGCA CAGTCGATAC ACCGATGTTC AATCCGCACG GGCTGGACAG GGATGCCCTC
AATGCAAGTT TCGGCAAACA GTTCCCCGGA GTCTCCCTGA GCCGGGTTGG CGATCCTTCG
GAAATAGCCC GCGCCAGCCT CTTTCTGGCC AGCGACGACG CTTCTTACGT TTCCGGGGCG
GAGCTGGCTG TGGACGGTGC CTGGACCTGC GGCGTCTACC TCCAAGAGAA ACCGGAACCT
AATTAA
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| Protein sequence | MGKLAGKVAI ITGGSRGMGR ATVEVFTKEG ARVIIADVLD AEGTALAQEM GDGAIYRHLD
VSDERGWGDV ARSAIDSFGR IDILVNNAAI FLYALIDETR SEAFRRLLDI NVIGPYLGMK
TVIPIMKKQR SGSIVNVSST DGLRGSCGMG AYNASKWGVR GLTKCVAMEV GPFGIRVNSL
HPGTVDTPMF NPHGLDRDAL NASFGKQFPG VSLSRVGDPS EIARASLFLA SDDASYVSGA
ELAVDGAWTC GVYLQEKPEP N
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